Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 RNU4-48P-201ENST00000365559 182 ntBASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 AC008562.1-201ENST00000521763 330 ntBASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 AGGF1P5-201ENST00000567900 919 ntBASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 EIF1P4-201ENST00000572664 335 ntBASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 AC092474.3-201ENST00000603022 568 ntBASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 AP000811.1-201ENST00000603803 651 ntBASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 AC009950.2-201ENST00000636548 183 ntBASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 SNORD115-41-201ENST00000363608 82 ntBASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 COL6A4P2-205ENST00000509855 506 ntBASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 MIR4529-201ENST00000578110 78 ntBASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 MTCO2P2-201ENST00000591258 225 ntBASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 RAC1P9-201ENST00000604990 392 ntBASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 AC093788.1-201ENST00000609356 927 ntBASIC-0.07□□□□□ -2.42
VPS13AQ96RL7 MIR635-201ENST00000384830 98 ntBASIC-0.08□□□□□ -2.42
VPS13AQ96RL7 AK6-205ENST00000618980 483 ntTSL 2 BASIC-0.08□□□□□ -2.42
VPS13AQ96RL7 Z75746.1-201ENST00000440243 2080 ntBASIC-0.08□□□□□ -2.42
VPS13AQ96RL7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC-0.08□□□□□ -2.42
VPS13AQ96RL7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC-0.08□□□□□ -2.42
VPS13AQ96RL7 MIR3198-2-201ENST00000577868 80 ntBASIC-0.08□□□□□ -2.42
VPS13AQ96RL7 AC091805.2-201ENST00000603848 235 ntBASIC-0.08□□□□□ -2.42
VPS13AQ96RL7 AC007038.2-201ENST00000608095 740 ntBASIC-0.08□□□□□ -2.42
VPS13AQ96RL7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.08□□□□□ -2.42
VPS13AQ96RL7 ZNF33BP1-201ENST00000452497 1834 ntBASIC-0.08□□□□□ -2.42
VPS13AQ96RL7 ARL2BPP3-201ENST00000421226 480 ntBASIC-0.08□□□□□ -2.42
VPS13AQ96RL7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC-0.08□□□□□ -2.42
VPS13AQ96RL7 AC074051.3-201ENST00000570238 358 ntBASIC-0.08□□□□□ -2.42
VPS13AQ96RL7 RNU4-5P-201ENST00000607255 135 ntBASIC-0.08□□□□□ -2.42
VPS13AQ96RL7 AC138393.1-203ENST00000327086 343 ntBASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 HMGN2P34-201ENST00000437647 269 ntBASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 OR2AQ1P-201ENST00000451972 200 ntBASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 HMGB1P36-201ENST00000487709 576 ntBASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 SNORA44.1-201ENST00000517031 108 ntBASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 LY96-202ENST00000518893 430 ntTSL 3 BASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 MIR3937-201ENST00000580135 106 ntBASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 SNORA25-201ENST00000384384 134 ntBASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 AP1S2P1-201ENST00000457344 379 ntBASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 MIR4764-201ENST00000580680 88 ntBASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 AC090616.3-201ENST00000582184 217 ntBASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 uc_338.34-201ENST00000617467 174 ntBASIC-0.09□□□□□ -2.42
VPS13AQ96RL7 AC093677.1-201ENST00000514414 678 ntBASIC-0.1□□□□□ -2.42
VPS13AQ96RL7 AC005668.1-201ENST00000571142 476 ntBASIC-0.1□□□□□ -2.42
VPS13AQ96RL7 RPL30P11-203ENST00000598995 310 ntBASIC-0.1□□□□□ -2.42
VPS13AQ96RL7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.1□□□□□ -2.42
VPS13AQ96RL7 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC-0.1□□□□□ -2.42
VPS13AQ96RL7 SNORD44.1-201ENST00000363202 61 ntBASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 RNY4P6-201ENST00000363667 96 ntBASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 AL591034.1-201ENST00000407447 340 ntBASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 CENPUP2-201ENST00000555897 1186 ntBASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 AP001269.3-201ENST00000588718 329 ntBASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 AL353149.1-201ENST00000610667 244 ntBASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 RNU6-674P-201ENST00000363831 107 ntBASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 AC099513.1-201ENST00000490423 301 ntBASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 RNU4-54P-201ENST00000516428 129 ntBASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 SCARNA16.2-201ENST00000516520 172 ntBASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 IGJP1-201ENST00000522682 475 ntBASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 AC016256.1-201ENST00000547971 354 ntBASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 AC098614.4-201ENST00000607601 462 ntBASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 AC100812.1-201ENST00000607622 580 ntBASIC-0.1□□□□□ -2.43
VPS13AQ96RL7 AL359704.1-201ENST00000411586 781 ntBASIC-0.11□□□□□ -2.43
VPS13AQ96RL7 TRAPPC2P8-201ENST00000440676 396 ntBASIC-0.11□□□□□ -2.43
VPS13AQ96RL7 MIR4458-201ENST00000578872 75 ntBASIC-0.11□□□□□ -2.43
VPS13AQ96RL7 AC105224.1-201ENST00000587055 421 ntBASIC-0.11□□□□□ -2.43
VPS13AQ96RL7 AL773524.1-201ENST00000614065 229 ntBASIC-0.11□□□□□ -2.43
VPS13AQ96RL7 AL589880.1-201ENST00000448271 287 ntBASIC-0.11□□□□□ -2.43
VPS13AQ96RL7 AC034114.1-201ENST00000520293 285 ntBASIC-0.11□□□□□ -2.43
VPS13AQ96RL7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC-0.11□□□□□ -2.43
VPS13AQ96RL7 MIR4716-201ENST00000579628 84 ntBASIC-0.11□□□□□ -2.43
VPS13AQ96RL7 AC025165.5-201ENST00000602802 578 ntBASIC-0.11□□□□□ -2.43
VPS13AQ96RL7 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 AC010409.1-201ENST00000487382 476 ntBASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 AL592221.1-201ENST00000605266 382 ntBASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 SNORA14A-201ENST00000364773 135 ntBASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 MIR518A1-201ENST00000385068 85 ntBASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 AC096920.1-201ENST00000423991 241 ntBASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 SNORD14A-201ENST00000606526 91 ntBASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 AC243772.1-201ENST00000451620 410 ntBASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 AC018659.1-201ENST00000551083 169 ntBASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 MIR5571-201ENST00000577998 113 ntBASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 AL355877.2-201ENST00000603670 358 ntBASIC-0.12□□□□□ -2.43
VPS13AQ96RL7 AL355297.3-201ENST00000604082 446 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms