Protein–RNA interactions for Protein: Q96Q05

TRAPPC9, Trafficking protein particle complex subunit 9, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9Q96Q05 BNIP3P6-201ENST00000549284 499 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 AC011611.1-201ENST00000552179 197 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 MTCO3P23-201ENST00000561363 289 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 AC010525.2-201ENST00000590920 195 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 AC073539.2-201ENST00000597113 165 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 AL161629.2-201ENST00000615347 275 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 MIR3651-201ENST00000630427 90 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 U6.99-201ENST00000637524 83 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 OR4G1P-203ENST00000641984 1631 ntBASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.32□□□□□ -1.88
TRAPPC9Q96Q05 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 RNA5SP197-201ENST00000363357 119 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 RNU4-66P-201ENST00000365199 138 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 Y_RNA.399-201ENST00000383955 105 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 RNU6-166P-201ENST00000384371 107 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 RNU6-658P-201ENST00000384606 106 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 MIR634-201ENST00000385208 97 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 AL353621.1-201ENST00000418219 243 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 AC005019.1-201ENST00000436455 431 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 AL078601.1-201ENST00000444542 271 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 NDUFB1P2-201ENST00000449477 176 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 RN7SL75P-201ENST00000461926 281 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 CCDC34P1-201ENST00000507441 517 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 AC114786.4-201ENST00000508771 728 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 RNU2-69P-201ENST00000516061 100 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 NACAP3-201ENST00000552100 481 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 HMGN2P15-201ENST00000585707 270 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 AC012119.1-201ENST00000603184 222 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 AC005000.2-201ENST00000605468 310 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 RMST_3.1-201ENST00000611651 109 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 AC022418.1-201ENST00000624118 445 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 AP003400.5-201ENST00000624827 617 ntBASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.31□□□□□ -1.88
TRAPPC9Q96Q05 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 AC004520.1-201ENST00000608362 1413 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 U3.6-201ENST00000363622 211 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 Y_RNA.623-201ENST00000411128 95 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 BPY2DP-201ENST00000422208 265 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 AC007560.1-201ENST00000426912 237 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 MTND1P2-201ENST00000430604 821 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 NFU1P2-201ENST00000448700 469 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 RPL21P99-201ENST00000480369 423 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 HMGB1P30-201ENST00000492455 606 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 MTND3P25-201ENST00000509243 135 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 SNORA70.19-201ENST00000516717 90 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 RNU6-1183P-201ENST00000517054 60 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 SNORA31.21-201ENST00000517180 77 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 RN7SKP57-201ENST00000517248 293 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 MIR4782-201ENST00000577987 79 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 AC004852.3-201ENST00000614131 326 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 AL356274.2-201ENST00000624379 3752 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 FAM35CP-201ENST00000554755 2470 ntBASIC3.3□□□□□ -1.88
TRAPPC9Q96Q05 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAPPC9Q96Q05 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRAPPC9Q96Q05 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAPPC9Q96Q05 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAPPC9Q96Q05 SNORD3E-201ENST00000362899 217 ntBASIC3.29□□□□□ -1.88
TRAPPC9Q96Q05 RNU6-82P-201ENST00000363970 107 ntBASIC3.29□□□□□ -1.88
TRAPPC9Q96Q05 Y_RNA.231-201ENST00000364358 102 ntBASIC3.29□□□□□ -1.88
TRAPPC9Q96Q05 RNU1-101P-201ENST00000391171 127 ntBASIC3.29□□□□□ -1.88
TRAPPC9Q96Q05 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.29□□□□□ -1.88
TRAPPC9Q96Q05 SNORA11.2-201ENST00000408318 127 ntBASIC3.29□□□□□ -1.88
TRAPPC9Q96Q05 RNU6-607P-201ENST00000411283 108 ntBASIC3.29□□□□□ -1.88
TRAPPC9Q96Q05 ARL5AP1-201ENST00000418991 388 ntBASIC3.29□□□□□ -1.88
TRAPPC9Q96Q05 SRIP2-201ENST00000428470 166 ntBASIC3.29□□□□□ -1.88
TRAPPC9Q96Q05 PRPS1P1-201ENST00000445305 876 ntBASIC3.29□□□□□ -1.88
TRAPPC9Q96Q05 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms