Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AP001148.1-201ENST00000624124 2359 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 NCAPGP1-201ENST00000505112 1814 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 RNU1-15P-201ENST00000353977 144 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 Y_RNA.478-201ENST00000384358 107 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 CYCSP33-201ENST00000414485 327 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 RAC1P3-201ENST00000416129 580 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 AL691449.1-201ENST00000426570 421 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 USP9YP7-201ENST00000436723 430 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 AC006011.1-201ENST00000442758 349 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 USP9YP32-201ENST00000452432 430 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 PRELID3BP1-201ENST00000457142 540 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 LINC01399-202ENST00000458450 244 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 AC008716.1-201ENST00000511084 513 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 SNORA31.22-201ENST00000517204 135 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 CPDP1-201ENST00000579660 283 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 AC131238.1-201ENST00000617135 328 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 AC009093.8-201ENST00000641769 292 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 AC016588.2-201ENST00000632484 3021 ntBASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 SNORA60-201ENST00000362396 134 ntBASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 Y_RNA.54-201ENST00000362766 105 ntBASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-200P-201ENST00000364743 107 ntBASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 Y_RNA.562-201ENST00000384695 113 ntBASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 MIR153-1-201ENST00000384914 90 ntBASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 MIR1289-1-201ENST00000408836 144 ntBASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 RPL21P38-201ENST00000418090 167 ntBASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-1037P-201ENST00000459571 107 ntBASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 AC120057.2-201ENST00000571520 271 ntBASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 AC005255.1-201ENST00000593748 216 ntBASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 AL355877.2-201ENST00000603670 358 ntBASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.67□□□□□ -1.66
SYNGAP1Q96PV0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-37P-201ENST00000362692 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-11P-201ENST00000364234 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-7-201ENST00000364784 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-8-201ENST00000365467 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-25P-201ENST00000383873 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-1-201ENST00000383898 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-48P-201ENST00000384161 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-36P-201ENST00000384172 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-4P-201ENST00000384205 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-5P-201ENST00000384238 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-3P-201ENST00000384314 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-16P-201ENST00000384385 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-15P-201ENST00000384534 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 Y_RNA.534-201ENST00000384599 112 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-2-201ENST00000384627 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-29P-201ENST00000384637 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-9-201ENST00000384776 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 U3.42-201ENST00000408746 214 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 AL353621.1-201ENST00000418219 243 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 AL590135.1-201ENST00000422215 156 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 AL159987.2-201ENST00000432754 307 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 FCF1P4-201ENST00000448326 183 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 AL139109.1-201ENST00000455491 297 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNA5SP154-201ENST00000516193 111 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 AC068446.3-201ENST00000555285 382 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 CYP4A43P-201ENST00000568156 121 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 MIR5684-201ENST00000585074 65 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms