Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 MIR4661-201ENST00000582720 75 ntBASIC0.13□□□□□ -2.39
CFAP54Q96N23 RNU1-36P-201ENST00000365130 165 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 AC022022.1-201ENST00000430304 178 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 RPS26P55-201ENST00000471178 356 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 COX7A2P2-201ENST00000505291 250 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 AC025465.4-201ENST00000513422 638 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 RN7SKP287-201ENST00000516546 266 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 OR6C73P-201ENST00000546432 358 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 AL355812.1-201ENST00000603215 216 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.12□□□□□ -2.39
CFAP54Q96N23 AC090132.2-201ENST00000615881 347 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 RNU6-193P-201ENST00000410977 107 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.12□□□□□ -2.39
CFAP54Q96N23 SNRPFP2-201ENST00000440710 251 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 AL589880.1-201ENST00000448271 287 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.12□□□□□ -2.39
CFAP54Q96N23 RPL22P13-201ENST00000493291 347 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 AL163195.1-201ENST00000496941 348 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 AC074198.2-201ENST00000508153 258 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.12□□□□□ -2.39
CFAP54Q96N23 AC091489.2-201ENST00000566263 604 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 AC011155.2-201ENST00000623202 216 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 RNU1-124P-201ENST00000363861 145 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 RNA5SP205-201ENST00000364653 136 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 Y_RNA.468-201ENST00000384298 102 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.12□□□□□ -2.39
CFAP54Q96N23 SNORD57-201ENST00000448188 72 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 TRGVB-201ENST00000453257 471 ntBASIC0.12□□□□□ -2.39
CFAP54Q96N23 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
CFAP54Q96N23 AC245060.5-201ENST00000610778 3293 ntBASIC0.11□□□□□ -2.39
CFAP54Q96N23 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.11□□□□□ -2.39
CFAP54Q96N23 RNU6-654P-201ENST00000364373 107 ntBASIC0.11□□□□□ -2.39
CFAP54Q96N23 MIR153-1-201ENST00000384914 90 ntBASIC0.11□□□□□ -2.39
CFAP54Q96N23 AL034418.1-201ENST00000448675 860 ntBASIC0.11□□□□□ -2.39
CFAP54Q96N23 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.11□□□□□ -2.39
CFAP54Q96N23 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
CFAP54Q96N23 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.11□□□□□ -2.39
CFAP54Q96N23 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.11□□□□□ -2.39
CFAP54Q96N23 LSM6P2-201ENST00000552208 177 ntBASIC0.11□□□□□ -2.39
CFAP54Q96N23 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
CFAP54Q96N23 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.11□□□□□ -2.39
CFAP54Q96N23 EIF4EP4-201ENST00000424916 578 ntBASIC0.11□□□□□ -2.39
CFAP54Q96N23 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.11□□□□□ -2.39
CFAP54Q96N23 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.11□□□□□ -2.39
CFAP54Q96N23 CYP2C59P-201ENST00000457790 269 ntBASIC0.11□□□□□ -2.39
CFAP54Q96N23 AC099513.1-201ENST00000490423 301 ntBASIC0.11□□□□□ -2.39
CFAP54Q96N23 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.11□□□□□ -2.39
CFAP54Q96N23 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.11□□□□□ -2.39
CFAP54Q96N23 AL161423.1-201ENST00000613700 262 ntBASIC0.11□□□□□ -2.39
CFAP54Q96N23 SNORD114-3-201ENST00000364969 75 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 MT-TQ-201ENST00000387372 72 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.1□□□□□ -2.39
CFAP54Q96N23 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 AC244023.1-201ENST00000426884 112 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.1□□□□□ -2.39
CFAP54Q96N23 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.1□□□□□ -2.39
CFAP54Q96N23 AC242498.1-201ENST00000604134 111 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 AC243994.1-201ENST00000618627 109 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.1□□□□□ -2.39
CFAP54Q96N23 RNU6-348P-201ENST00000384386 107 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 MIR224-201ENST00000384889 81 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 RNU4-78P-201ENST00000410940 126 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.1□□□□□ -2.39
CFAP54Q96N23 CR769776.1-201ENST00000441254 787 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.1□□□□□ -2.39
CFAP54Q96N23 RNU6-567P-201ENST00000516746 107 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.1□□□□□ -2.39
CFAP54Q96N23 MTCO2P2-201ENST00000591258 225 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 AL138880.2-201ENST00000616214 239 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 AC009509.4-201ENST00000619202 509 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 MIR411-201ENST00000362239 96 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 SNORA4.1-201ENST00000364263 144 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 RPL30P11-201ENST00000495304 339 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 SNORA31.13-201ENST00000516624 135 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.1□□□□□ -2.39
CFAP54Q96N23 AC123767.1-202ENST00000620407 817 ntBASIC0.1□□□□□ -2.39
CFAP54Q96N23 Y_RNA.410-201ENST00000383992 113 ntBASIC0.09□□□□□ -2.39
CFAP54Q96N23 PAXBP1P1-201ENST00000449315 447 ntBASIC0.09□□□□□ -2.39
CFAP54Q96N23 NDUFB4P10-201ENST00000452541 359 ntBASIC0.09□□□□□ -2.39
CFAP54Q96N23 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.09□□□□□ -2.39
CFAP54Q96N23 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.09□□□□□ -2.39
CFAP54Q96N23 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.09□□□□□ -2.39
CFAP54Q96N23 OR10V3P-201ENST00000525712 725 ntBASIC0.09□□□□□ -2.39
CFAP54Q96N23 AC118273.2-201ENST00000532092 465 ntBASIC0.09□□□□□ -2.39
CFAP54Q96N23 AL450336.1-201ENST00000605180 586 ntBASIC0.09□□□□□ -2.39
CFAP54Q96N23 AP002791.1-201ENST00000623291 381 ntBASIC0.09□□□□□ -2.39
CFAP54Q96N23 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.09□□□□□ -2.39
CFAP54Q96N23 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.09□□□□□ -2.4
CFAP54Q96N23 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.09□□□□□ -2.4
CFAP54Q96N23 RNU6-1327P-201ENST00000365302 105 ntBASIC0.09□□□□□ -2.4
CFAP54Q96N23 AL359704.1-201ENST00000411586 781 ntBASIC0.09□□□□□ -2.4
CFAP54Q96N23 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
CFAP54Q96N23 AL354941.1-201ENST00000438600 464 ntBASIC0.09□□□□□ -2.4
CFAP54Q96N23 RPL31P3-201ENST00000458430 332 ntBASIC0.09□□□□□ -2.4
CFAP54Q96N23 AP001025.1-201ENST00000486139 332 ntBASIC0.09□□□□□ -2.4
CFAP54Q96N23 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.09□□□□□ -2.4
CFAP54Q96N23 IGKV1-22-201ENST00000524313 326 ntBASIC0.09□□□□□ -2.4
CFAP54Q96N23 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.09□□□□□ -2.4
CFAP54Q96N23 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms