Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 CIR1P3-201ENST00000405137 479 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 FTH1P15-201ENST00000406984 280 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 ATP5A1P2-201ENST00000412323 255 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 TOMM20P4-201ENST00000427861 435 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 RPS15AP7-201ENST00000439294 405 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 PRPS1P1-201ENST00000445305 876 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 AL441985.1-201ENST00000457727 251 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 AC103987.1-201ENST00000473394 348 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 AC098799.2-201ENST00000509466 868 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 RNU6-835P-201ENST00000516974 104 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 MTND4P7-201ENST00000523876 130 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 AP004607.1-201ENST00000524456 203 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 AC027807.1-201ENST00000559921 996 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 AC025165.5-201ENST00000602802 578 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 AC245389.1-201ENST00000605141 529 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 AC010338.1-201ENST00000621823 717 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 AC091903.1-201ENST00000624322 454 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 SCARNA4-202ENST00000625402 129 ntBASIC2.85□□□□□ -1.95
CMTM3Q96MX0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CMTM3Q96MX0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 RNA5SP119-201ENST00000362715 117 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 RNU6-942P-201ENST00000363002 107 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 Y_RNA.372-201ENST00000365599 102 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 RNU6-1215P-201ENST00000384441 102 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 Y_RNA.516-201ENST00000384541 124 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 MIR627-201ENST00000384979 97 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 RNU6-780P-201ENST00000391030 104 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 SNORA57.1-201ENST00000391227 145 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 RPS4XP7-201ENST00000406274 780 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 AL606923.1-201ENST00000406616 190 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 AC004383.1-201ENST00000438135 289 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 RPS29P7-201ENST00000439662 171 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 RPL23AP11-201ENST00000475260 469 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 MRPL42P6-201ENST00000486397 371 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 AC006445.1-201ENST00000491925 405 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 AC114781.4-201ENST00000513707 639 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 SNORA31.6-201ENST00000516241 130 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 Y_RNA.687-201ENST00000516558 91 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 ZNF519P2-201ENST00000557032 169 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 MIR4424-201ENST00000585257 86 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 AP000787.2-201ENST00000604432 568 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 uc_338.34-201ENST00000617467 174 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 AL731566.2-201ENST00000618971 317 ntBASIC2.84□□□□□ -1.95
CMTM3Q96MX0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.84□□□□□ -1.95
CMTM3Q96MX0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.84□□□□□ -1.96
CMTM3Q96MX0 AC010329.5-201ENST00000623497 2174 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.83□□□□□ -1.96
CMTM3Q96MX0 Y_RNA.480-201ENST00000384364 102 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 RPL17P50-201ENST00000396131 546 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 AL590002.1-201ENST00000406554 418 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.83□□□□□ -1.96
CMTM3Q96MX0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.83□□□□□ -1.96
CMTM3Q96MX0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.83□□□□□ -1.96
CMTM3Q96MX0 AL159987.2-201ENST00000432754 307 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 CALM1P1-201ENST00000442082 433 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 NUTF2P7-201ENST00000453086 375 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 AC082651.2-201ENST00000496833 166 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CMTM3Q96MX0 AC079140.5-201ENST00000507882 310 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 FCF1P8-201ENST00000510322 597 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.83□□□□□ -1.96
CMTM3Q96MX0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.83□□□□□ -1.96
CMTM3Q96MX0 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.83□□□□□ -1.96
CMTM3Q96MX0 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.83□□□□□ -1.96
CMTM3Q96MX0 MIR3160-1-201ENST00000577972 85 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 AC103810.1-201ENST00000579873 453 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 MIR3941-201ENST00000582572 103 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 OR1M4P-201ENST00000589199 287 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms