Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AL133217.1-201ENST00000450980 425 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 TAF9P2-201ENST00000454958 515 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 SNRPFP4-201ENST00000456366 242 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AC080013.2-201ENST00000460866 323 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 RNU6-581P-201ENST00000516214 105 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 Y_RNA.672-201ENST00000516289 104 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 Y_RNA.689-201ENST00000516589 107 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 RNA5SP82-201ENST00000516707 92 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 SNORA31.19-201ENST00000517079 126 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 RPL21P5-201ENST00000554662 472 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AL157871.3-201ENST00000557231 293 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 SNORD53-201ENST00000579969 78 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 MIR5007-201ENST00000583098 95 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AC012065.4-201ENST00000602445 679 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 MIR15A-201ENST00000607334 83 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AL451064.1-201ENST00000607718 471 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AC011890.2-201ENST00000613393 294 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AC010678.1-201ENST00000614118 713 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AF246928.1-201ENST00000623768 87 ntBASIC2.51□□□□□ -2.01
ZNF560Q96MR9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
ZNF560Q96MR9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AL109809.4-201ENST00000603520 2185 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 Z82209.1-201ENST00000422141 2135 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AL359854.1-201ENST00000614203 1594 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 RNU5E-1-201ENST00000362477 120 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 RNA5SP126-201ENST00000365092 109 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 RNU6-748P-201ENST00000384648 107 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 MIR147B-201ENST00000390185 80 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 RPL23AP32-201ENST00000395315 459 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 RNU6-1025P-201ENST00000410629 104 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AC107081.1-201ENST00000414975 361 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AC092809.3-201ENST00000415453 231 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AL135786.1-201ENST00000415892 214 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF560Q96MR9 FABP5P14-201ENST00000437273 393 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AL078601.1-201ENST00000444542 271 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AC092001.1-201ENST00000453012 261 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AC090096.1-201ENST00000489168 390 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AC116655.1-201ENST00000508324 901 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF560Q96MR9 RNA5SP281-201ENST00000516504 135 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 RNU6-759P-201ENST00000516740 103 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 Y_RNA.717-201ENST00000517106 92 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 RNA5SP402-201ENST00000517148 110 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.5□□□□□ -2.01
ZNF560Q96MR9 OR5B19P-201ENST00000531766 928 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AC010186.2-204ENST00000537668 439 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 LRRC34P1-201ENST00000542742 915 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AC009063.1-201ENST00000563342 702 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF560Q96MR9 MIR3199-1-201ENST00000582434 88 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.5□□□□□ -2.01
ZNF560Q96MR9 MIR4765-201ENST00000585007 77 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AL021997.1-201ENST00000605757 193 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AL359547.2-201ENST00000615810 418 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
ZNF560Q96MR9 AC064859.1-201ENST00000624741 174 ntBASIC2.5□□□□□ -2.01
ZNF560Q96MR9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ZNF560Q96MR9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ZNF560Q96MR9 Y_RNA.33-201ENST00000362591 102 ntBASIC2.49□□□□□ -2.01
ZNF560Q96MR9 RNU6-1280P-201ENST00000365211 107 ntBASIC2.49□□□□□ -2.01
ZNF560Q96MR9 U8.8-201ENST00000365399 135 ntBASIC2.49□□□□□ -2.01
ZNF560Q96MR9 RNU6-395P-201ENST00000365662 106 ntBASIC2.49□□□□□ -2.01
ZNF560Q96MR9 U6atac.2-201ENST00000408644 118 ntBASIC2.49□□□□□ -2.01
ZNF560Q96MR9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF560Q96MR9 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF560Q96MR9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.49□□□□□ -2.01
ZNF560Q96MR9 AC004383.1-201ENST00000438135 289 ntBASIC2.49□□□□□ -2.01
ZNF560Q96MR9 AL441985.1-201ENST00000457727 251 ntBASIC2.49□□□□□ -2.01
ZNF560Q96MR9 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF560Q96MR9 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.49□□□□□ -2.01
ZNF560Q96MR9 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF560Q96MR9 SNORA31.11-201ENST00000516528 139 ntBASIC2.49□□□□□ -2.01
ZNF560Q96MR9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF560Q96MR9 AC091544.4-201ENST00000555268 342 ntBASIC2.49□□□□□ -2.01
ZNF560Q96MR9 MYL12BP1-201ENST00000569826 507 ntBASIC2.49□□□□□ -2.01
ZNF560Q96MR9 AC009977.1-201ENST00000586015 570 ntBASIC2.49□□□□□ -2.01
ZNF560Q96MR9 Z99289.3-201ENST00000605586 594 ntBASIC2.49□□□□□ -2.01
ZNF560Q96MR9 AC025048.6-202ENST00000627667 438 ntBASIC2.49□□□□□ -2.01
ZNF560Q96MR9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AC006020.1-201ENST00000420179 1854 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 RNU6-301P-201ENST00000384277 107 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms