Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC008716.1-201ENST00000511084 513 ntBASIC3.1□□□□□ -1.91
SKA1Q96BD8 MIR3913-1-201ENST00000577744 102 ntBASIC3.1□□□□□ -1.91
SKA1Q96BD8 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.1□□□□□ -1.91
SKA1Q96BD8 AC110760.3-201ENST00000598794 467 ntBASIC3.1□□□□□ -1.91
SKA1Q96BD8 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.1□□□□□ -1.91
SKA1Q96BD8 AC012119.1-201ENST00000603184 222 ntBASIC3.1□□□□□ -1.91
SKA1Q96BD8 AC008121.1-201ENST00000603244 268 ntBASIC3.1□□□□□ -1.91
SKA1Q96BD8 Z84480.1-201ENST00000605131 311 ntBASIC3.1□□□□□ -1.91
SKA1Q96BD8 ATP1B3P1-201ENST00000605365 821 ntBASIC3.1□□□□□ -1.91
SKA1Q96BD8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.1□□□□□ -1.91
SKA1Q96BD8 SEPT14P19-203ENST00000633205 211 ntBASIC3.1□□□□□ -1.91
SKA1Q96BD8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SKA1Q96BD8 AL035425.3-201ENST00000564206 4996 ntBASIC3.1□□□□□ -1.91
SKA1Q96BD8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.09□□□□□ -1.91
SKA1Q96BD8 AC138393.1-203ENST00000327086 343 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 RNU6-74P-201ENST00000384235 107 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 MIR181B1-201ENST00000385240 110 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SKA1Q96BD8 U3.37-201ENST00000408528 213 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.09□□□□□ -1.91
SKA1Q96BD8 BX276092.3-201ENST00000424182 230 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.09□□□□□ -1.91
SKA1Q96BD8 MTCO3P5-201ENST00000433620 714 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.09□□□□□ -1.91
SKA1Q96BD8 AC004383.1-201ENST00000438135 289 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.09□□□□□ -1.91
SKA1Q96BD8 RNU7-182P-201ENST00000459009 62 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 KLF3P2-201ENST00000465138 268 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 HMGB1P30-201ENST00000492455 606 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 RNA5SP76-201ENST00000516277 87 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.09□□□□□ -1.91
SKA1Q96BD8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.09□□□□□ -1.91
SKA1Q96BD8 OR4R1P-201ENST00000529879 463 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.09□□□□□ -1.91
SKA1Q96BD8 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.09□□□□□ -1.91
SKA1Q96BD8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.09□□□□□ -1.91
SKA1Q96BD8 AC012213.3-201ENST00000577199 777 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.09□□□□□ -1.91
SKA1Q96BD8 AL670379.10-201ENST00000604330 253 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 AL670379.9-201ENST00000605428 253 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 AC069234.5-201ENST00000611056 416 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.09□□□□□ -1.91
SKA1Q96BD8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.09□□□□□ -1.91
SKA1Q96BD8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.08□□□□□ -1.92
SKA1Q96BD8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SKA1Q96BD8 MIR22-201ENST00000362190 85 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 RNU6-1287P-201ENST00000362914 107 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 SNORA62.1-201ENST00000364287 154 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SKA1Q96BD8 RNU6-1060P-201ENST00000384664 107 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 MIR10A-201ENST00000385043 110 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 AL139039.1-201ENST00000401900 692 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 TOMM20P4-201ENST00000427861 435 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.08□□□□□ -1.92
SKA1Q96BD8 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.08□□□□□ -1.92
SKA1Q96BD8 RPL39P40-201ENST00000445481 146 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 AP000936.2-201ENST00000447151 681 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 EEF1B2P7-201ENST00000451177 676 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 AC012308.1-201ENST00000451232 178 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.08□□□□□ -1.92
SKA1Q96BD8 RPL36AP48-201ENST00000485521 314 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 MTAPP1-201ENST00000489154 819 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.08□□□□□ -1.92
SKA1Q96BD8 AC098799.2-201ENST00000509466 868 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.08□□□□□ -1.92
SKA1Q96BD8 SNORD27.1-201ENST00000516319 72 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 FAM92A1P1-201ENST00000528023 890 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 AL356057.1-201ENST00000533798 831 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.08□□□□□ -1.92
SKA1Q96BD8 AC023824.2-201ENST00000566185 400 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 AL391840.1-201ENST00000571144 367 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.08□□□□□ -1.92
SKA1Q96BD8 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.08□□□□□ -1.92
SKA1Q96BD8 AC069294.1-201ENST00000608397 350 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.08□□□□□ -1.92
SKA1Q96BD8 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 AC005332.10-201ENST00000612725 619 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 AP001486.3-201ENST00000615334 372 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SKA1Q96BD8 AL359740.1-201ENST00000624340 592 ntBASIC3.08□□□□□ -1.92
SKA1Q96BD8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SKA1Q96BD8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SKA1Q96BD8 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SKA1Q96BD8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SKA1Q96BD8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SKA1Q96BD8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SKA1Q96BD8 RNU6-858P-201ENST00000362436 107 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 SNORD3E-201ENST00000362899 217 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 RNU6-181P-201ENST00000363225 107 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 RNU6-851P-201ENST00000384565 107 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 MIR578-201ENST00000384828 96 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 MIR1-2-201ENST00000384961 85 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 RNU6-220P-201ENST00000390919 107 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 OR6C66P-201ENST00000414917 930 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 AC016831.2-201ENST00000417179 352 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.07□□□□□ -1.92
SKA1Q96BD8 AC025750.2-201ENST00000442609 450 ntBASIC3.07□□□□□ -1.92
SKA1Q96BD8 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.07□□□□□ -1.92
SKA1Q96BD8 RPL23AP20-201ENST00000447965 421 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms