Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CKAP2Q8WWK9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.58□□□□□ -2
CKAP2Q8WWK9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CKAP2Q8WWK9 Y_RNA.367-201ENST00000365544 101 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 SNORA75B-201ENST00000384053 137 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 SNORD116-2-201ENST00000384274 95 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 RNU6-166P-201ENST00000384371 107 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 RNU6-348P-201ENST00000384386 107 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 SNORD116-6-201ENST00000384711 96 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 SNORA40C-201ENST00000391285 128 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.58□□□□□ -2
CKAP2Q8WWK9 USP9YP20-201ENST00000419224 558 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.58□□□□□ -2
CKAP2Q8WWK9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.58□□□□□ -2
CKAP2Q8WWK9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.58□□□□□ -2
CKAP2Q8WWK9 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.58□□□□□ -2
CKAP2Q8WWK9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.58□□□□□ -2
CKAP2Q8WWK9 AL445687.1-201ENST00000439946 251 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.58□□□□□ -2
CKAP2Q8WWK9 AL121769.1-201ENST00000469473 401 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 FAM92A1P2-202ENST00000504766 877 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 RNU5F-8P-201ENST00000515941 111 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 SNORD19.2-201ENST00000516978 73 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.58□□□□□ -2
CKAP2Q8WWK9 AL391813.1-201ENST00000603098 260 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 AL645944.1-201ENST00000603857 493 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 AC091152.3-201ENST00000604227 325 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 Z84480.1-201ENST00000605131 311 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 AC010678.1-201ENST00000614118 713 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.58□□□□□ -2
CKAP2Q8WWK9 CU459211.1-201ENST00000635667 749 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.58□□□□□ -2
CKAP2Q8WWK9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CKAP2Q8WWK9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CKAP2Q8WWK9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CKAP2Q8WWK9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC004944.1-201ENST00000517807 3059 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 RNU6-282P-201ENST00000365357 103 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 SNORA44-201ENST00000384584 132 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 RNU6-19P-201ENST00000384718 107 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 MIR1-2-201ENST00000384961 85 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 U3.26-201ENST00000391236 204 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 AL138827.1-201ENST00000402666 306 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.57□□□□□ -2
CKAP2Q8WWK9 COTL1P1-201ENST00000422309 375 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC079781.2-201ENST00000446424 169 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.57□□□□□ -2
CKAP2Q8WWK9 AL583843.1-201ENST00000456070 346 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 RPL31P3-201ENST00000458430 332 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 KLF3P2-201ENST00000465138 268 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.57□□□□□ -2
CKAP2Q8WWK9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.57□□□□□ -2
CKAP2Q8WWK9 AIG1P1-201ENST00000503376 148 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC010424.1-201ENST00000506336 297 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC008716.1-201ENST00000511084 513 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 SNORA31.6-201ENST00000516241 130 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC109329.2-201ENST00000519658 482 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 CKS1BP7-201ENST00000522230 235 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 OR5AL2P-201ENST00000532185 920 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC006362.1-201ENST00000567392 174 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC106782.4-201ENST00000568264 210 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 MIR4528-201ENST00000577763 90 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC138761.3-201ENST00000579993 334 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 MIR3117-201ENST00000584034 78 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC008521.1-201ENST00000587471 187 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC072046.2-201ENST00000618366 268 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC138649.3-201ENST00000622154 254 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC006386.2-201ENST00000624491 75 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 AC012005.1-201ENST00000624575 75 ntBASIC2.57□□□□□ -2
CKAP2Q8WWK9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.57□□□□□ -2
CKAP2Q8WWK9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
CKAP2Q8WWK9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.56□□□□□ -2
CKAP2Q8WWK9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.56□□□□□ -2
CKAP2Q8WWK9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.56□□□□□ -2
CKAP2Q8WWK9 RNU6-7-201ENST00000364784 107 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 RNU6-1280P-201ENST00000365211 107 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 RNU6-8-201ENST00000365467 107 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.56□□□□□ -2
CKAP2Q8WWK9 RNU6-456P-201ENST00000384493 107 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 Y_RNA.553-201ENST00000384670 102 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 Y_RNA.576-201ENST00000384781 102 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.56□□□□□ -2
CKAP2Q8WWK9 UBE2V1P2-201ENST00000397758 440 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 AL139039.1-201ENST00000401900 692 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 U3.37-201ENST00000408528 213 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.56□□□□□ -2
CKAP2Q8WWK9 PIGFP2-201ENST00000421400 651 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 MTCO2P34-201ENST00000421994 607 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 PTGES3P4-201ENST00000426243 356 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 MYL8P-204ENST00000431574 518 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 AL358934.1-201ENST00000432346 324 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.56□□□□□ -2
CKAP2Q8WWK9 MTCO1P19-201ENST00000443487 500 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 AC079448.1-201ENST00000449377 373 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms