Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 AC000123.3-201ENST00000624029 4975 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 RNA5SP307-201ENST00000362863 116 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 RNA5SP130-201ENST00000364431 114 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 Y_RNA.405-201ENST00000383979 100 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 Y_RNA.451-201ENST00000384200 100 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 SNORD63-201ENST00000384262 68 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 Y_RNA.524-201ENST00000384564 100 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 Y_RNA.561-201ENST00000384694 100 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 RNU6-417P-201ENST00000384712 107 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 SNORA48.7-201ENST00000391302 135 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 AL160275.2-201ENST00000412010 394 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 ELOCP18-201ENST00000434209 337 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 USP9YP7-201ENST00000436723 430 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 HIGD1AP2-201ENST00000446367 280 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 USP9YP32-201ENST00000452432 430 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 AC022493.1-201ENST00000492984 337 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 HIGD1AP3-201ENST00000515857 278 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 MIR892C-201ENST00000516410 77 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 RNA5SP360-201ENST00000516555 118 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 CASP1P1-201ENST00000526345 212 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 MIR4659A-201ENST00000580269 81 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 AC015813.6-201ENST00000624409 5808 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 PRO1804-201ENST00000623780 2050 ntBASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.69
SHKBP1Q8TBC3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.69
SHKBP1Q8TBC3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 RN7SKP224-201ENST00000364140 325 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.418-201ENST00000384029 102 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 MIR513A2-201ENST00000385249 127 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 SNORD78.2-201ENST00000391076 69 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.629-201ENST00000411368 105 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 RPL23AP36-201ENST00000413895 458 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 HMGB1P27-201ENST00000431429 603 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 AL589765.3-201ENST00000446084 462 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 BX276092.4-201ENST00000452056 248 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 AP001324.2-201ENST00000461163 319 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 AC020593.1-201ENST00000507399 299 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 RNA5SP73-201ENST00000516744 108 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 MTND6P33-201ENST00000571794 183 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 AC123786.2-201ENST00000603459 275 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 BRDTP1-201ENST00000605735 677 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 AC015813.4-201ENST00000610469 179 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 AC011476.5-201ENST00000615594 130 ntBASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
SHKBP1Q8TBC3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 U3.6-201ENST00000363622 211 ntBASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 MT-TC-201ENST00000387405 66 ntBASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 AC034236.1-201ENST00000469891 373 ntBASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 RPL23AP65-201ENST00000475608 468 ntBASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 ANXA2P1-201ENST00000505539 926 ntBASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-1219P-201ENST00000516143 112 ntBASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 RNU2-31P-201ENST00000516954 155 ntBASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 AL358913.1-201ENST00000554342 121 ntBASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 RPL23AP97-201ENST00000568955 471 ntBASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 AC006130.2-201ENST00000586202 326 ntBASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 RPL7P50-201ENST00000600588 727 ntBASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 AP000787.2-201ENST00000604432 568 ntBASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 AL365222.1-201ENST00000614661 98 ntBASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 MAPK10-304ENST00000641341 3984 ntBASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms