Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AL033519.2-201ENST00000403958 392 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC078974.1-201ENST00000411597 223 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 USP9YP33-201ENST00000412220 421 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 USP9YP35-201ENST00000435696 412 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 MTND2P29-201ENST00000438595 412 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 BRK1P2-201ENST00000442875 223 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC092001.1-201ENST00000453012 261 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC027575.1-201ENST00000481064 460 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC107393.1-201ENST00000512403 346 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC079598.5-201ENST00000547460 117 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC007375.1-201ENST00000554513 578 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC009712.1-201ENST00000564938 316 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC024614.2-201ENST00000577584 372 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AL596327.1-201ENST00000603629 213 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC131235.4-201ENST00000609288 620 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC103710.2-201ENST00000609912 942 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 MIR6134-201ENST00000617606 109 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC012150.2-201ENST00000621300 544 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AL138955.1-201ENST00000622881 1040 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC138627.2-201ENST00000624202 601 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC017037.3-201ENST00000625016 472 ntBASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.7□□□□□ -2.14
CLHC1Q8NHS4 AC002543.1-201ENST00000299783 1954 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 RNU5E-1-201ENST00000362477 120 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 RNU6-462P-201ENST00000362659 105 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 Z98749.2-208ENST00000381646 500 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 AL359704.1-201ENST00000411586 781 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 POLHP1-201ENST00000411806 470 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 OR9R1P-201ENST00000412200 877 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 RPL23AP39-201ENST00000415533 405 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 AL358794.1-201ENST00000445689 381 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 OR6C5P-201ENST00000452388 923 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 AL137159.1-201ENST00000452808 512 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 KATNBL1P6-201ENST00000453433 915 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 snoU13.15-201ENST00000459407 104 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 AC112771.1-201ENST00000463581 102 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 AC108729.1-201ENST00000487812 947 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 AC139453.3-201ENST00000493276 369 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 AC008834.1-201ENST00000511612 175 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 RNU6-581P-201ENST00000516214 105 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 RNU6-1183P-201ENST00000517054 60 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 EEF1A1P37-201ENST00000522748 715 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 PSMA3P-201ENST00000555485 635 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 AC126118.1-201ENST00000607744 628 ntBASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.69□□□□□ -2.14
CLHC1Q8NHS4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 SNORD48-201ENST00000364953 64 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AC019129.1-201ENST00000403786 261 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AC127391.1-201ENST00000411737 98 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AC104651.1-201ENST00000427559 735 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 TOMM20P4-201ENST00000427861 435 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AL645568.3-201ENST00000433683 316 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 RPS25P9-201ENST00000435591 252 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 RPS15AP9-201ENST00000439856 381 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 RNU6-64P-201ENST00000517119 105 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 NDUFA5P6-201ENST00000542110 379 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 YWHAZP1-201ENST00000556286 722 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 MTCYBP23-201ENST00000558717 1102 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 SNRPGP17-201ENST00000603780 214 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 PART1_2.1-201ENST00000612397 250 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AC006386.1-201ENST00000619436 415 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 MIR7843-201ENST00000622274 79 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 AC112204.3-201ENST00000623822 332 ntBASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.68□□□□□ -2.14
CLHC1Q8NHS4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms