Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 MAPK10-322ENST00000641485 4530 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
VPS52Q8N1B4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS52Q8N1B4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS52Q8N1B4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS52Q8N1B4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS52Q8N1B4 MTND5P7-201ENST00000413558 1798 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 RPL30P16-201ENST00000419341 429 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 ATG3P1-201ENST00000419507 911 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 SRIP2-201ENST00000428470 166 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS52Q8N1B4 MTND4P25-201ENST00000441039 533 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS52Q8N1B4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS52Q8N1B4 AC104058.1-201ENST00000448028 297 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 AL135752.1-201ENST00000479477 471 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS52Q8N1B4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS52Q8N1B4 MTCO3P9-201ENST00000506989 781 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 RNU4-29P-201ENST00000515943 174 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 RNU6-1282P-201ENST00000516735 96 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 RNU6-914P-201ENST00000516749 109 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 RN7SKP282-201ENST00000516824 299 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 RNA5SP380-201ENST00000517190 98 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 RNA5SP291-201ENST00000517222 105 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS52Q8N1B4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VPS52Q8N1B4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS52Q8N1B4 MIR15A-201ENST00000607334 83 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 MIR622-201ENST00000638396 96 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 AC099654.14-201ENST00000638599 341 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 ASNSP3-201ENST00000451989 1306 ntBASIC3.36□□□□□ -1.87
VPS52Q8N1B4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS52Q8N1B4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS52Q8N1B4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS52Q8N1B4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
VPS52Q8N1B4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS52Q8N1B4 AL049641.1-201ENST00000441055 1948 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS52Q8N1B4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS52Q8N1B4 SNORA71.1-201ENST00000364523 117 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 SNORD15B-201ENST00000384714 146 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
VPS52Q8N1B4 CISD1P1-201ENST00000393907 327 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 EEF1A1P40-201ENST00000412883 573 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS52Q8N1B4 MTND4LP11-201ENST00000422184 280 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 AL160275.3-201ENST00000423876 471 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 MTCO2P3-201ENST00000442543 421 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS52Q8N1B4 SNRPFP3-201ENST00000457792 225 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 SUMO2P6-201ENST00000505273 288 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 AC091885.1-201ENST00000506658 268 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS52Q8N1B4 AC074344.1-201ENST00000512823 224 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 AL137161.1-201ENST00000532231 390 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS52Q8N1B4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
VPS52Q8N1B4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS52Q8N1B4 BNIP3P9-201ENST00000603714 553 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 AL138889.2-201ENST00000603883 242 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 AL158032.1-201ENST00000605401 106 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 AC009570.1-201ENST00000609599 745 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.35□□□□□ -1.87
VPS52Q8N1B4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS52Q8N1B4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS52Q8N1B4 AL359693.1-201ENST00000614959 2407 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS52Q8N1B4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
VPS52Q8N1B4 OR4G1P-203ENST00000641984 1631 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS52Q8N1B4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 RNU6-512P-201ENST00000364438 103 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 RNU4-20P-201ENST00000365601 151 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 RNU6-38P-201ENST00000384085 107 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 SNORA54-201ENST00000384281 123 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 RN7SKP220-201ENST00000410611 288 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 RNU6-373P-201ENST00000411247 98 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 BTF3L4P3-201ENST00000418879 476 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 AL139413.1-201ENST00000421309 217 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 AC007919.1-201ENST00000429380 217 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.34□□□□□ -1.87
VPS52Q8N1B4 PIGFP3-201ENST00000441918 722 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS52Q8N1B4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS52Q8N1B4 RNU6-333P-201ENST00000459117 107 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 KC877373.1-201ENST00000479066 408 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS52Q8N1B4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS52Q8N1B4 RNA5SP217-201ENST00000515959 91 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 AF235103.2-201ENST00000525753 346 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 DNAJC8P1-201ENST00000554535 372 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms