Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 SNORD56.5-201ENST00000364281 72 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 SNORA4.3-201ENST00000365564 137 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 RNU1-138P-201ENST00000384093 164 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 SNORA24.1-201ENST00000384401 135 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-658P-201ENST00000384606 106 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 RNU2-49P-201ENST00000410666 184 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-193P-201ENST00000410977 107 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 RNA5SP492-201ENST00000411330 114 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 ATG3P1-201ENST00000419507 911 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 PIGFP2-201ENST00000421400 651 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 GPR143P-201ENST00000434155 205 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 MTCYBP1-201ENST00000454315 1119 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 AC109927.2-201ENST00000506416 303 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 MTND4P2-201ENST00000507767 1203 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 AC117522.2-201ENST00000510049 657 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-703P-201ENST00000516946 107 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-410P-201ENST00000517006 107 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 AP001646.1-201ENST00000527936 915 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 ADI1P3-201ENST00000549509 470 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 AC024619.4-201ENST00000580924 316 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 NBR2-204ENST00000587322 63 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 AC098848.2-201ENST00000588023 330 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 AL158032.1-201ENST00000605401 106 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 AC013562.2-201ENST00000611632 603 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 AC104237.2-201ENST00000612456 443 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 AL359547.2-201ENST00000615810 418 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 ELF2P3-201ENST00000445099 1506 ntBASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
C9orf40Q8IXQ3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 RNU4-82P-201ENST00000362443 140 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 XGY1-201ENST00000381172 446 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 SNORA67.4-201ENST00000384688 142 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 RPL7P37-201ENST00000425095 738 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 MTATP6P16-201ENST00000434543 526 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AC098831.1-201ENST00000440661 216 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 UBBP3-201ENST00000445497 241 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AC104389.3-201ENST00000445629 235 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AC079781.2-201ENST00000446424 169 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 RPS15AP27-201ENST00000449183 343 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 MTATP6P7-201ENST00000453315 681 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AC128713.1-201ENST00000471495 306 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AC116562.3-201ENST00000506136 177 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AC079140.3-201ENST00000511111 550 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-430P-201ENST00000517078 107 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 RNA5SP402-201ENST00000517148 110 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-1315P-201ENST00000517187 99 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AC068587.5-201ENST00000528506 175 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AC020895.1-201ENST00000595362 272 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AL139286.2-201ENST00000606838 396 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 AC012409.4-201ENST00000612923 249 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 CTSLP2-204ENST00000629029 392 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 IGHVIII-44-202ENST00000636235 289 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 U6.99-201ENST00000637524 83 ntBASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
C9orf40Q8IXQ3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AC069528.2-201ENST00000624849 1991 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AC103710.2-202ENST00000641454 2853 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 Y_RNA.51-201ENST00000362725 102 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-179P-201ENST00000363350 107 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 Y_RNA.359-201ENST00000365498 102 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-61P-201ENST00000365528 109 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 BX682237.1-201ENST00000415016 335 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 CDK8P2-201ENST00000415020 547 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AC133104.1-201ENST00000429100 218 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AC009296.1-201ENST00000443146 155 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 Z96811.1-201ENST00000445880 108 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AC079448.1-201ENST00000449377 373 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 RPL31P41-201ENST00000477967 372 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms