Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RNU6-393P-201ENST00000384475 107 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 RNU6-831P-201ENST00000384548 107 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 MIR490-201ENST00000384865 128 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 MIR200C-201ENST00000384980 68 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 SNORD70.1-201ENST00000391007 85 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AL122016.1-201ENST00000403365 367 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 MTND2P23-201ENST00000422990 651 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 RPL21P40-201ENST00000428586 483 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AL590383.1-201ENST00000428602 75 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 PRPS1P1-201ENST00000445305 876 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 MRPL50P4-201ENST00000446432 475 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 NIPA2P5-201ENST00000452282 464 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 RPL21P10-201ENST00000463521 490 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 RPS20P22-201ENST00000473700 357 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AC103851.1-201ENST00000506833 274 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 RNU6-189P-201ENST00000516120 101 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 RNU6-914P-201ENST00000516749 109 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AP000763.2-201ENST00000540641 163 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AC011611.1-201ENST00000552179 197 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AL355375.2-201ENST00000574825 175 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 BNIP3P25-201ENST00000596023 559 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AL360085.1-201ENST00000604713 532 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AC021646.1-201ENST00000605469 484 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AL022345.1-201ENST00000607292 135 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 U2.17-201ENST00000611454 95 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AC073476.4-201ENST00000628409 72 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 TPTEP1-208ENST00000636884 213 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 AC010733.2-201ENST00000589496 5702 ntBASIC3.38□□□□□ -1.87
RFX6Q8HWS3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX6Q8HWS3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RFX6Q8HWS3 HSPA8P4-201ENST00000511877 1920 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 Y_RNA.399-201ENST00000383955 105 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 Y_RNA.414-201ENST00000384011 101 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 RNU6-1013P-201ENST00000384180 107 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 RNA5SP219-201ENST00000390940 113 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 AL139397.2-201ENST00000404529 772 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 RNA5SP229-201ENST00000410809 99 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 BX682237.1-201ENST00000415016 335 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 AC091390.3-201ENST00000426478 338 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.37□□□□□ -1.87
RFX6Q8HWS3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.37□□□□□ -1.87
RFX6Q8HWS3 PPP1R2P5-201ENST00000457256 603 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 AC091153.1-201ENST00000466297 402 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 RPL21P93-201ENST00000480465 489 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.37□□□□□ -1.87
RFX6Q8HWS3 RPS15AP34-201ENST00000487776 387 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.37□□□□□ -1.87
RFX6Q8HWS3 HIGD1AP13-201ENST00000509878 289 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 RNA5SP217-201ENST00000515959 91 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 RNU1-143P-201ENST00000516296 146 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 SNORD59.2-201ENST00000516873 68 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 RNU6-143P-201ENST00000516942 93 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.37□□□□□ -1.87
RFX6Q8HWS3 SCOCP1-201ENST00000554676 349 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 U1.23-201ENST00000610293 146 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 AL157817.1-201ENST00000614264 790 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 RNU1-68P-201ENST00000615382 146 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 U1.39-201ENST00000621562 146 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.37□□□□□ -1.87
RFX6Q8HWS3 RMST_7.1-201ENST00000621935 268 ntBASIC3.37□□□□□ -1.87
RFX6Q8HWS3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.37□□□□□ -1.87
RFX6Q8HWS3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.37□□□□□ -1.87
RFX6Q8HWS3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFX6Q8HWS3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFX6Q8HWS3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFX6Q8HWS3 Z83843.1-201ENST00000604070 3685 ntBASIC3.36□□□□□ -1.87
RFX6Q8HWS3 AC008568.2-201ENST00000623862 2313 ntBASIC3.36□□□□□ -1.87
RFX6Q8HWS3 RNA5SP119-201ENST00000362715 117 ntBASIC3.36□□□□□ -1.87
RFX6Q8HWS3 RNU6-1167P-201ENST00000363227 94 ntBASIC3.36□□□□□ -1.87
RFX6Q8HWS3 Y_RNA.132-201ENST00000363421 102 ntBASIC3.36□□□□□ -1.87
RFX6Q8HWS3 Y_RNA.167-201ENST00000363735 109 ntBASIC3.36□□□□□ -1.87
RFX6Q8HWS3 SNORD113-7-201ENST00000363762 77 ntBASIC3.36□□□□□ -1.87
RFX6Q8HWS3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RFX6Q8HWS3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RFX6Q8HWS3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.36□□□□□ -1.87
RFX6Q8HWS3 SNORA16.2-201ENST00000390991 127 ntBASIC3.36□□□□□ -1.87
RFX6Q8HWS3 EIF4E2P1-201ENST00000393781 255 ntBASIC3.36□□□□□ -1.87
RFX6Q8HWS3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.36□□□□□ -1.87
RFX6Q8HWS3 RPL32P35-201ENST00000415214 394 ntBASIC3.36□□□□□ -1.87
RFX6Q8HWS3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.36□□□□□ -1.87
RFX6Q8HWS3 MTCO2P12-201ENST00000427426 682 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms