Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MIR517C-201ENST00000385103 95 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 HMGN2P39-201ENST00000398005 273 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 RNA5SP450-201ENST00000411206 102 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 AC108667.1-201ENST00000428618 249 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 RSU1P2-202ENST00000437884 485 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 MTCO2P25-201ENST00000447065 681 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 USP9YP10-201ENST00000454868 628 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 AC010631.1-201ENST00000474150 156 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 RPS15AP36-201ENST00000492022 382 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 AF213884.2-201ENST00000510417 903 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 AC024589.1-201ENST00000512207 263 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 MTND5P13-201ENST00000513046 1079 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 AC110760.3-202ENST00000515177 371 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 RNA5SP458-201ENST00000516188 119 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 RN7SKP258-201ENST00000517151 304 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 DUXAP1-201ENST00000556632 463 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 AL133153.1-201ENST00000557756 303 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 AL512347.1-201ENST00000566420 503 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 AC068620.3-201ENST00000602749 560 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 AC112220.2-201ENST00000605513 533 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 AC090186.1-201ENST00000605991 572 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 DUSP12P1-201ENST00000612874 516 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
LRRC28Q86X40 MTND5P33-201ENST00000571250 1450 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 RNU1-62P-201ENST00000362599 164 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 Y_RNA.140-201ENST00000363474 103 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 RNU6-560P-201ENST00000364007 108 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 RNU6-188P-201ENST00000364207 107 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 RNU6-432P-201ENST00000384196 109 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 RNU6-748P-201ENST00000384648 107 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 AL033519.2-201ENST00000403958 392 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 MIR1304-201ENST00000408243 91 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 UBE2FP1-201ENST00000416536 447 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 MTCYBP38-201ENST00000417160 1123 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 AC244035.1-201ENST00000430042 390 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 VN1R108P-201ENST00000431580 830 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC28Q86X40 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC28Q86X40 HSPE1P24-201ENST00000450782 238 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC28Q86X40 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC28Q86X40 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.31□□□□□ -2.2
LRRC28Q86X40 RNU6-467P-201ENST00000517027 110 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 RNA5SP165-201ENST00000517142 115 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC28Q86X40 AC092451.2-201ENST00000538746 658 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 NACAP3-201ENST00000552100 481 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.31□□□□□ -2.2
LRRC28Q86X40 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.31□□□□□ -2.2
LRRC28Q86X40 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.31□□□□□ -2.2
LRRC28Q86X40 AF038458.1-201ENST00000588406 262 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 AP001269.3-201ENST00000588718 329 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.31□□□□□ -2.2
LRRC28Q86X40 BNIP3P25-201ENST00000596023 559 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 AL606834.3-201ENST00000602615 496 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 BX248123.2-201ENST00000606318 124 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
LRRC28Q86X40 uc_338.14-201ENST00000613162 166 ntBASIC1.31□□□□□ -2.2
LRRC28Q86X40 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.31□□□□□ -2.2
LRRC28Q86X40 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.31□□□□□ -2.2
LRRC28Q86X40 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC28Q86X40 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
LRRC28Q86X40 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.31□□□□□ -2.2
LRRC28Q86X40 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
LRRC28Q86X40 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
LRRC28Q86X40 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.3□□□□□ -2.2
LRRC28Q86X40 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.3□□□□□ -2.2
LRRC28Q86X40 RNU6-289P-201ENST00000364093 107 ntBASIC1.3□□□□□ -2.2
LRRC28Q86X40 RNU6-60P-201ENST00000364792 103 ntBASIC1.3□□□□□ -2.2
LRRC28Q86X40 U8.10-201ENST00000384260 133 ntBASIC1.3□□□□□ -2.2
LRRC28Q86X40 Y_RNA.472-201ENST00000384322 102 ntBASIC1.3□□□□□ -2.2
LRRC28Q86X40 RNU6-298P-201ENST00000390888 96 ntBASIC1.3□□□□□ -2.2
LRRC28Q86X40 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
LRRC28Q86X40 AL359634.1-202ENST00000404721 284 ntBASIC1.3□□□□□ -2.2
LRRC28Q86X40 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.3□□□□□ -2.2
LRRC28Q86X40 MTCO3P46-201ENST00000425787 232 ntBASIC1.3□□□□□ -2.2
LRRC28Q86X40 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.3□□□□□ -2.2
LRRC28Q86X40 NANOGP2-201ENST00000435391 727 ntBASIC1.3□□□□□ -2.2
LRRC28Q86X40 AC118469.1-201ENST00000442943 488 ntBASIC1.3□□□□□ -2.2
LRRC28Q86X40 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.3□□□□□ -2.2
LRRC28Q86X40 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.3□□□□□ -2.2
LRRC28Q86X40 MTCO1P27-201ENST00000448269 226 ntBASIC1.3□□□□□ -2.2
LRRC28Q86X40 AP000542.1-201ENST00000448473 371 ntBASIC1.3□□□□□ -2.2
LRRC28Q86X40 AMD1P1-201ENST00000457220 922 ntBASIC1.3□□□□□ -2.2
LRRC28Q86X40 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms