Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.21□□□□□ -1.74
UBE3DQ7Z6J8 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.21□□□□□ -1.74
UBE3DQ7Z6J8 AP005019.3-201ENST00000620418 560 ntBASIC4.21□□□□□ -1.74
UBE3DQ7Z6J8 AC090617.7-201ENST00000623952 126 ntBASIC4.21□□□□□ -1.74
UBE3DQ7Z6J8 AC007546.2-201ENST00000623996 360 ntBASIC4.21□□□□□ -1.74
UBE3DQ7Z6J8 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
UBE3DQ7Z6J8 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
UBE3DQ7Z6J8 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
UBE3DQ7Z6J8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UBE3DQ7Z6J8 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
UBE3DQ7Z6J8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UBE3DQ7Z6J8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UBE3DQ7Z6J8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 MIR3065-201ENST00000390137 79 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 SNORA53-201ENST00000391141 249 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 U3.37-201ENST00000408528 213 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 RPS6P12-201ENST00000432491 726 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 AC007389.2-201ENST00000434630 306 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 SNRPEP9-201ENST00000436794 238 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 AC009237.8-201ENST00000445492 379 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 AC139453.3-201ENST00000493276 369 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 Y_RNA.703-201ENST00000516846 111 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 MIR4782-201ENST00000577987 79 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 MIR4715-201ENST00000584117 79 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 AC079587.1-201ENST00000603846 277 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 AL356157.2-201ENST00000605122 111 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 AC073657.2-201ENST00000605661 303 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 RPL23AP88-201ENST00000605759 454 ntBASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
UBE3DQ7Z6J8 AC009541.1-201ENST00000438279 2662 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 ZNF826P-207ENST00000622273 1910 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 MIR411-201ENST00000362239 96 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 Y_RNA.199-201ENST00000364014 102 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 RNU6-1286P-201ENST00000383871 107 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 RNU6-968P-201ENST00000384076 107 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 SNORA19-201ENST00000384737 128 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 RNA5SP372-201ENST00000390836 115 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 RNU1-139P-201ENST00000391307 165 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 RPS20P14-201ENST00000412545 360 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 RAB9AP3-201ENST00000412737 573 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 AC009296.1-201ENST00000443146 155 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 RAB9AP1-201ENST00000449393 573 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 RPL7P49-201ENST00000471402 708 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 SNORA70.16-201ENST00000516390 95 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 MIR3910-1-201ENST00000580936 111 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 AC136601.2-201ENST00000604356 474 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 AC037487.3-201ENST00000606668 112 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
UBE3DQ7Z6J8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 RNA5SP28-201ENST00000363841 119 ntBASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 RNA5SP22-201ENST00000365393 109 ntBASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 RNU6-326P-201ENST00000365480 107 ntBASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 Y_RNA.504-201ENST00000384481 104 ntBASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 Y_RNA.602-201ENST00000410535 92 ntBASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 AC009237.10-201ENST00000414112 510 ntBASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 AL356387.2-201ENST00000422272 243 ntBASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 Z82188.1-201ENST00000436709 154 ntBASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 U8.22-201ENST00000459141 133 ntBASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 TOMM22P6-201ENST00000465035 409 ntBASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 RNU6-703P-201ENST00000516946 107 ntBASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 AC008745.1-201ENST00000604064 271 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms