Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AL161788.1-201ENST00000441805 169 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 RAD1P2-201ENST00000446414 663 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 AC019176.1-201ENST00000518519 225 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 AC006199.1-201ENST00000548728 219 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 NACAP3-201ENST00000552100 481 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 HSPE1P19-201ENST00000603327 295 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 U1.36-201ENST00000620684 176 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 AC007490.1-201ENST00000624321 703 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 ZNF680P1-201ENST00000436625 1469 ntBASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 AC068700.1-201ENST00000565862 3754 ntBASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 RNU1-78P-201ENST00000391248 165 ntBASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 PIGPP2-201ENST00000411569 458 ntBASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 AC005345.1-201ENST00000431868 217 ntBASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 RPL22P13-201ENST00000493291 347 ntBASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 AC093677.1-201ENST00000514414 678 ntBASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 SNORA48.11-201ENST00000517015 89 ntBASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 MIR4698-201ENST00000577795 80 ntBASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 AC005261.5-201ENST00000596280 355 ntBASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 SNRPGP17-201ENST00000603780 214 ntBASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 AC016727.2-201ENST00000603988 621 ntBASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 AL355802.3-201ENST00000607571 545 ntBASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 MTND1P37-201ENST00000636562 264 ntBASIC1.03□□□□□ -2.24
CCDC171Q6TFL3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 DYNLT3P2-201ENST00000442517 295 ntBASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 ARPC3P5-201ENST00000448802 534 ntBASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 IGJP1-201ENST00000522682 475 ntBASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 HSPE1P4-201ENST00000550617 308 ntBASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 AC108706.1-201ENST00000611053 297 ntBASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 AC022709.1-201ENST00000615967 87 ntBASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 AC073569.3-201ENST00000619055 682 ntBASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 AL118508.4-201ENST00000624142 1176 ntBASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC171Q6TFL3 ICE2P2-201ENST00000483823 2787 ntBASIC1.01□□□□□ -2.25
CCDC171Q6TFL3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CCDC171Q6TFL3 RNU6-252P-201ENST00000363232 107 ntBASIC1.01□□□□□ -2.25
CCDC171Q6TFL3 CCDC58P2-201ENST00000417131 366 ntBASIC1.01□□□□□ -2.25
CCDC171Q6TFL3 AC007919.1-201ENST00000429380 217 ntBASIC1.01□□□□□ -2.25
CCDC171Q6TFL3 USP9YP24-201ENST00000434374 697 ntBASIC1.01□□□□□ -2.25
CCDC171Q6TFL3 NDUFA5P7-201ENST00000452914 242 ntBASIC1.01□□□□□ -2.25
CCDC171Q6TFL3 AC018868.1-201ENST00000491307 315 ntBASIC1.01□□□□□ -2.25
CCDC171Q6TFL3 AC016957.1-201ENST00000534895 309 ntBASIC1.01□□□□□ -2.25
CCDC171Q6TFL3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.01□□□□□ -2.25
CCDC171Q6TFL3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC171Q6TFL3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC171Q6TFL3 AC004067.1-201ENST00000608733 700 ntBASIC1.01□□□□□ -2.25
CCDC171Q6TFL3 DUSP12P1-201ENST00000612874 516 ntBASIC1.01□□□□□ -2.25
CCDC171Q6TFL3 AP003485.1-201ENST00000625093 753 ntBASIC1.01□□□□□ -2.25
CCDC171Q6TFL3 SNORD114-2-201ENST00000363953 78 ntBASIC1□□□□□ -2.25
CCDC171Q6TFL3 RNU6-115P-201ENST00000364310 107 ntBASIC1□□□□□ -2.25
CCDC171Q6TFL3 MIR29C-201ENST00000385231 88 ntBASIC1□□□□□ -2.25
CCDC171Q6TFL3 RNU11-5P-201ENST00000391216 129 ntBASIC1□□□□□ -2.25
CCDC171Q6TFL3 USP9YP19-201ENST00000412165 485 ntBASIC1□□□□□ -2.25
CCDC171Q6TFL3 USP9YP13-201ENST00000417797 480 ntBASIC1□□□□□ -2.25
CCDC171Q6TFL3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1□□□□□ -2.25
CCDC171Q6TFL3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1□□□□□ -2.25
CCDC171Q6TFL3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1□□□□□ -2.25
CCDC171Q6TFL3 SMURF2P1-201ENST00000514992 481 ntBASIC1□□□□□ -2.25
CCDC171Q6TFL3 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1□□□□□ -2.25
CCDC171Q6TFL3 AC135279.1-201ENST00000543493 504 ntBASIC1□□□□□ -2.25
CCDC171Q6TFL3 BPTFP1-201ENST00000579209 492 ntBASIC1□□□□□ -2.25
CCDC171Q6TFL3 AC022387.2-201ENST00000604050 448 ntBASIC1□□□□□ -2.25
CCDC171Q6TFL3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CCDC171Q6TFL3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.99□□□□□ -2.25
CCDC171Q6TFL3 SNORA27.3-201ENST00000364937 134 ntBASIC0.99□□□□□ -2.25
CCDC171Q6TFL3 RNU6-40P-201ENST00000384254 107 ntBASIC0.99□□□□□ -2.25
CCDC171Q6TFL3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
CCDC171Q6TFL3 C1DP1-201ENST00000426049 402 ntBASIC0.99□□□□□ -2.25
CCDC171Q6TFL3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.99□□□□□ -2.25
CCDC171Q6TFL3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.99□□□□□ -2.25
CCDC171Q6TFL3 FCF1P6-201ENST00000456841 595 ntBASIC0.99□□□□□ -2.25
CCDC171Q6TFL3 RNU6-775P-201ENST00000459318 96 ntBASIC0.99□□□□□ -2.25
CCDC171Q6TFL3 RPL39P28-201ENST00000465655 155 ntBASIC0.99□□□□□ -2.25
CCDC171Q6TFL3 AC018437.1-201ENST00000492214 406 ntBASIC0.99□□□□□ -2.25
CCDC171Q6TFL3 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms