Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNU6-178P-201ENST00000384631 104 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 RNA5SP317-201ENST00000410176 116 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 RNA5SP311-201ENST00000411290 116 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 RPL19P1-201ENST00000411635 428 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 PIGFP3-201ENST00000441918 722 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 PRDX3P3-201ENST00000447765 522 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 AL451050.1-201ENST00000450126 415 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF43Q68DV7 HSPE1P25-201ENST00000455484 251 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF43Q68DV7 RNU7-87P-201ENST00000459343 62 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 RN7SL132P-201ENST00000478131 296 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 RPS27AP13-201ENST00000498403 237 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 RNA5SP315-201ENST00000516340 116 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 RNA5SP312-201ENST00000517068 116 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 AP003730.1-201ENST00000524605 285 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 AL590705.4-201ENST00000532209 134 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 TRAV8-5-201ENST00000537369 341 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF43Q68DV7 AC240442.1-201ENST00000616055 283 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 MIR4727-201ENST00000622232 55 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 AC091905.2-201ENST00000623143 306 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 AC097372.5-201ENST00000623665 376 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF43Q68DV7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
RNF43Q68DV7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF43Q68DV7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
RNF43Q68DV7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF43Q68DV7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RNF43Q68DV7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF43Q68DV7 AC008725.1-201ENST00000605123 2263 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF43Q68DV7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RNF43Q68DV7 SDAD1P2-201ENST00000441308 2028 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF43Q68DV7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF43Q68DV7 AC007685.1-201ENST00000329806 452 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF43Q68DV7 SNORD50.1-201ENST00000362987 71 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 RNU6-1179P-201ENST00000384667 107 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 RNU6-959P-201ENST00000384671 107 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 MIR135A2-201ENST00000384854 100 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 RNA5SP44-201ENST00000410446 133 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.55□□□□□ -1.68
RNF43Q68DV7 AL031659.1-201ENST00000447075 539 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 AL358232.1-201ENST00000448030 501 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF43Q68DV7 RNU1-86P-201ENST00000516108 154 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 RNU1-107P-201ENST00000516617 154 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 RNA5SP143-201ENST00000516936 115 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.55□□□□□ -1.68
RNF43Q68DV7 OR4H12P-201ENST00000556269 907 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.55□□□□□ -1.68
RNF43Q68DV7 BDH2P1-201ENST00000602288 736 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 AL162424.1-201ENST00000602325 221 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 AC009318.2-201ENST00000610917 651 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 MIR8076-201ENST00000611401 83 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 AL450472.3-201ENST00000615578 367 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RNF43Q68DV7 MIR3653-201ENST00000625572 110 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 MIR492-201ENST00000638676 116 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RNF43Q68DV7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF43Q68DV7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RNF43Q68DV7 MAPK10-253ENST00000641010 4072 ntBASIC4.55□□□□□ -1.68
RNF43Q68DV7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RNF43Q68DV7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF43Q68DV7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF43Q68DV7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RNF43Q68DV7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
RNF43Q68DV7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF43Q68DV7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF43Q68DV7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF43Q68DV7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF43Q68DV7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RNF43Q68DV7 SNORA53-201ENST00000391141 249 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 RNU6-918P-201ENST00000391219 106 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 RNU6-651P-201ENST00000411040 105 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 RNU6-1135P-201ENST00000411083 103 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 RNU6-603P-201ENST00000411403 107 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 AL391219.1-201ENST00000422570 483 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF43Q68DV7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF43Q68DV7 U8.22-201ENST00000459141 133 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 RN7SL542P-201ENST00000467147 294 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF43Q68DV7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF43Q68DV7 RN7SL691P-201ENST00000494487 301 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF43Q68DV7 HIGD1AP3-201ENST00000515857 278 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 RNU1-45P-201ENST00000517191 141 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF43Q68DV7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.54□□□□□ -1.68
RNF43Q68DV7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF43Q68DV7 RPL23AP97-201ENST00000568955 471 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 AC024220.1-201ENST00000603675 484 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 AC009314.1-201ENST00000603871 304 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 AC113403.1-201ENST00000604910 193 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 AC011921.3-201ENST00000605540 361 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 BRDTP1-201ENST00000605735 677 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms