Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RNU1-124P-201ENST00000363861 145 ntBASIC0.32□□□□□ -2.36
CDC42BPAQ5VT25 RNU6-26P-201ENST00000383985 107 ntBASIC0.32□□□□□ -2.36
CDC42BPAQ5VT25 Y_RNA.476-201ENST00000384347 108 ntBASIC0.32□□□□□ -2.36
CDC42BPAQ5VT25 AL135790.2-201ENST00000437701 267 ntBASIC0.32□□□□□ -2.36
CDC42BPAQ5VT25 RPL30P7-201ENST00000479312 323 ntBASIC0.32□□□□□ -2.36
CDC42BPAQ5VT25 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.32□□□□□ -2.36
CDC42BPAQ5VT25 MTCYBP16-201ENST00000509187 1129 ntBASIC0.32□□□□□ -2.36
CDC42BPAQ5VT25 AC022447.1-201ENST00000515358 464 ntBASIC0.32□□□□□ -2.36
CDC42BPAQ5VT25 SNORD116-28-201ENST00000516123 91 ntBASIC0.32□□□□□ -2.36
CDC42BPAQ5VT25 MIR5589-201ENST00000579442 60 ntBASIC0.32□□□□□ -2.36
CDC42BPAQ5VT25 MIR4636-201ENST00000582271 80 ntBASIC0.32□□□□□ -2.36
CDC42BPAQ5VT25 MTCYBP22-201ENST00000603788 447 ntBASIC0.32□□□□□ -2.36
CDC42BPAQ5VT25 AP003973.1-201ENST00000604639 691 ntBASIC0.32□□□□□ -2.36
CDC42BPAQ5VT25 AC099842.1-201ENST00000619919 596 ntBASIC0.32□□□□□ -2.36
CDC42BPAQ5VT25 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.32□□□□□ -2.36
CDC42BPAQ5VT25 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CDC42BPAQ5VT25 NDUFS5P1-201ENST00000405668 289 ntBASIC0.31□□□□□ -2.36
CDC42BPAQ5VT25 RSU1P2-202ENST00000437884 485 ntBASIC0.31□□□□□ -2.36
CDC42BPAQ5VT25 AC004854.1-201ENST00000440356 349 ntBASIC0.31□□□□□ -2.36
CDC42BPAQ5VT25 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.31□□□□□ -2.36
CDC42BPAQ5VT25 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.31□□□□□ -2.36
CDC42BPAQ5VT25 APOOP3-201ENST00000536787 586 ntBASIC0.31□□□□□ -2.36
CDC42BPAQ5VT25 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.31□□□□□ -2.36
CDC42BPAQ5VT25 MIR4661-201ENST00000582720 75 ntBASIC0.31□□□□□ -2.36
CDC42BPAQ5VT25 AC146944.4-201ENST00000602697 718 ntBASIC0.31□□□□□ -2.36
CDC42BPAQ5VT25 AP003399.1-201ENST00000637534 361 ntBASIC0.31□□□□□ -2.36
CDC42BPAQ5VT25 RNU6-1249P-201ENST00000363237 111 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 MIR608-201ENST00000384820 100 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 RNU6-1197P-201ENST00000391183 107 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 MTCO3P12-201ENST00000416718 547 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 RNU7-40P-201ENST00000516397 64 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 RAB11AP2-201ENST00000545905 639 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 AC115085.1-201ENST00000588924 229 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 AC096586.2-201ENST00000610260 441 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 Y_RNA.390-201ENST00000383932 102 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 RNU6-968P-201ENST00000384076 107 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 AC010099.3-201ENST00000423896 409 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 RNU7-23P-201ENST00000459465 62 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 AC090115.3-201ENST00000553218 849 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 AL356432.3-201ENST00000568952 465 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 BX322635.1-201ENST00000605804 496 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 U4atac.1-201ENST00000618345 95 ntBASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.3□□□□□ -2.36
CDC42BPAQ5VT25 MTCO1P23-201ENST00000415223 1526 ntBASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 RNA5SP25-201ENST00000410815 110 ntBASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 MTND4LP3-201ENST00000468320 276 ntBASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 MIR892C-201ENST00000516410 77 ntBASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 AP003122.4-201ENST00000530980 758 ntBASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 AC012435.1-202ENST00000568772 240 ntBASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 BNIP3P16-201ENST00000589779 534 ntBASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 AL138478.1-201ENST00000612252 832 ntBASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 MIR8074-201ENST00000615081 81 ntBASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CDC42BPAQ5VT25 RNU4-23P-201ENST00000362839 140 ntBASIC0.28□□□□□ -2.36
CDC42BPAQ5VT25 RPS3AP37-201ENST00000419176 745 ntBASIC0.28□□□□□ -2.36
CDC42BPAQ5VT25 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.28□□□□□ -2.36
CDC42BPAQ5VT25 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.28□□□□□ -2.36
CDC42BPAQ5VT25 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.28□□□□□ -2.36
CDC42BPAQ5VT25 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.28□□□□□ -2.36
CDC42BPAQ5VT25 CYP2C59P-201ENST00000457790 269 ntBASIC0.28□□□□□ -2.36
CDC42BPAQ5VT25 RNU6-420P-201ENST00000458780 107 ntBASIC0.28□□□□□ -2.36
CDC42BPAQ5VT25 LARP7P4-201ENST00000481075 878 ntBASIC0.28□□□□□ -2.36
CDC42BPAQ5VT25 AC145146.1-201ENST00000496370 254 ntBASIC0.28□□□□□ -2.36
CDC42BPAQ5VT25 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.28□□□□□ -2.36
CDC42BPAQ5VT25 RNA5SP112-201ENST00000515937 99 ntBASIC0.28□□□□□ -2.36
CDC42BPAQ5VT25 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.28□□□□□ -2.36
CDC42BPAQ5VT25 RNU1-23P-201ENST00000363361 144 ntBASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 RNU4-78P-201ENST00000410940 126 ntBASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 FGF7P5-201ENST00000441829 291 ntBASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 RNA5SP57-201ENST00000459463 123 ntBASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 AC079140.2-201ENST00000506193 142 ntBASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 AC004923.2-201ENST00000529649 369 ntBASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 AL359212.1-201ENST00000556608 614 ntBASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 AC126177.8-201ENST00000618339 1015 ntBASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 AC008443.7-201ENST00000622195 246 ntBASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 RNU6-263P-201ENST00000363811 107 ntBASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 AC069282.1-201ENST00000411911 526 ntBASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 RPS25P9-201ENST00000435591 252 ntBASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 CR769776.1-201ENST00000441254 787 ntBASIC0.27□□□□□ -2.37
CDC42BPAQ5VT25 TRBVB-201ENST00000477100 408 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms