Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MIR147B-201ENST00000390185 80 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 AF279873.1-201ENST00000523393 313 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.18□□□□□ -2.38
UBR4Q5T4S7 AL161734.1-201ENST00000609720 557 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.18□□□□□ -2.38
UBR4Q5T4S7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
UBR4Q5T4S7 RNU1-72P-201ENST00000362976 153 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.17□□□□□ -2.38
UBR4Q5T4S7 PDCL2P1-201ENST00000419302 352 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AC073464.3-201ENST00000422564 712 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AC110079.1-202ENST00000635213 138 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 Y_RNA.439-201ENST00000384119 94 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.17□□□□□ -2.38
UBR4Q5T4S7 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 MIR4458-201ENST00000578872 75 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AC023141.4-201ENST00000412031 328 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.17□□□□□ -2.38
UBR4Q5T4S7 RPL23AP6-201ENST00000446637 472 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 RNU6-711P-201ENST00000517255 106 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AP003066.2-201ENST00000529375 555 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AL355297.2-201ENST00000604792 129 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 SDR42E1P2-201ENST00000614861 481 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 SDR42E1P4-201ENST00000620894 481 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.17□□□□□ -2.38
UBR4Q5T4S7 ZNF29P-201ENST00000225587 168 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 Y_RNA.119-201ENST00000363301 96 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 SSXP4-201ENST00000451349 245 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AC109810.1-201ENST00000534066 224 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AP001486.3-201ENST00000615334 372 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 AC114546.3-201ENST00000623582 1734 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
UBR4Q5T4S7 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
UBR4Q5T4S7 PRPS1P1-201ENST00000445305 876 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 OR6C72P-201ENST00000451403 892 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 MIR4499-201ENST00000584834 69 ntBASIC0.17□□□□□ -2.38
UBR4Q5T4S7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
UBR4Q5T4S7 RNU6-19P-201ENST00000384718 107 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 MIR146A-201ENST00000385201 99 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.16□□□□□ -2.38
UBR4Q5T4S7 HMGN2P13-201ENST00000476476 274 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 MIR4512-201ENST00000583257 77 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 SNORD23.1-201ENST00000408212 104 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 AC083875.1-201ENST00000419509 405 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 AC098862.1-201ENST00000504991 413 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.16□□□□□ -2.38
UBR4Q5T4S7 AL592148.2-201ENST00000612210 372 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 U3.9-201ENST00000363823 204 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
UBR4Q5T4S7 RPS3AP37-201ENST00000419176 745 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 AC093155.1-201ENST00000440164 826 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 MTCYBP23-201ENST00000558717 1102 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 HSBP1P2-201ENST00000299671 229 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 MIR325-201ENST00000385260 98 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 AP002784.2-201ENST00000397300 549 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 RPS4XP3-201ENST00000398541 413 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
UBR4Q5T4S7 RAC1P8-201ENST00000427086 527 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 AL035410.1-201ENST00000427409 427 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 RABEPKP1-201ENST00000440529 1026 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 AC091959.1-201ENST00000495857 238 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 RNU6-1191P-201ENST00000516799 107 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 SCARNA16.5-201ENST00000517114 183 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.16□□□□□ -2.38
UBR4Q5T4S7 AC010809.3-201ENST00000621310 641 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 AC091925.2-201ENST00000625059 256 ntBASIC0.16□□□□□ -2.38
UBR4Q5T4S7 SNORA14A-201ENST00000364773 135 ntBASIC0.15□□□□□ -2.38
UBR4Q5T4S7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.15□□□□□ -2.38
UBR4Q5T4S7 AC244023.1-201ENST00000426884 112 ntBASIC0.15□□□□□ -2.38
UBR4Q5T4S7 RPL7P29-201ENST00000437151 728 ntBASIC0.15□□□□□ -2.38
UBR4Q5T4S7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.15□□□□□ -2.38
UBR4Q5T4S7 AL590705.4-201ENST00000532209 134 ntBASIC0.15□□□□□ -2.38
UBR4Q5T4S7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.15□□□□□ -2.38
UBR4Q5T4S7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.15□□□□□ -2.38
UBR4Q5T4S7 TMF1P1-201ENST00000576058 373 ntBASIC0.15□□□□□ -2.38
UBR4Q5T4S7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.15□□□□□ -2.38
UBR4Q5T4S7 AC242498.1-201ENST00000604134 111 ntBASIC0.15□□□□□ -2.38
UBR4Q5T4S7 AC243994.1-201ENST00000618627 109 ntBASIC0.15□□□□□ -2.38
UBR4Q5T4S7 Y_RNA.577-201ENST00000384794 101 ntBASIC0.15□□□□□ -2.39
UBR4Q5T4S7 AL356057.2-201ENST00000403318 432 ntBASIC0.15□□□□□ -2.39
UBR4Q5T4S7 USP9YP17-201ENST00000444617 696 ntBASIC0.15□□□□□ -2.39
UBR4Q5T4S7 AC098583.1-201ENST00000480875 255 ntBASIC0.15□□□□□ -2.39
UBR4Q5T4S7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.15□□□□□ -2.39
UBR4Q5T4S7 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.15□□□□□ -2.39
UBR4Q5T4S7 AL136363.1-201ENST00000605349 337 ntBASIC0.15□□□□□ -2.39
UBR4Q5T4S7 Y_RNA.494-201ENST00000384432 111 ntBASIC0.15□□□□□ -2.39
UBR4Q5T4S7 RNU6-880P-201ENST00000384526 107 ntBASIC0.15□□□□□ -2.39
UBR4Q5T4S7 AP000567.1-201ENST00000406413 156 ntBASIC0.15□□□□□ -2.39
UBR4Q5T4S7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.15□□□□□ -2.39
UBR4Q5T4S7 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.15□□□□□ -2.39
UBR4Q5T4S7 RNU1-98P-201ENST00000458992 160 ntBASIC0.15□□□□□ -2.39
UBR4Q5T4S7 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.15□□□□□ -2.39
UBR4Q5T4S7 MIR29B2-201ENST00000385055 81 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms