Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNU6-1245P-201ENST00000411130 106 ntBASIC5.61□□□□□ -1.51
VARS2Q5ST30 RPS20P14-201ENST00000412545 360 ntBASIC5.61□□□□□ -1.51
VARS2Q5ST30 AL135786.1-201ENST00000415892 214 ntBASIC5.61□□□□□ -1.51
VARS2Q5ST30 GNG5P5-201ENST00000420444 220 ntBASIC5.61□□□□□ -1.51
VARS2Q5ST30 OR2AM1P-201ENST00000422137 422 ntBASIC5.61□□□□□ -1.51
VARS2Q5ST30 NDUFB4P8-201ENST00000435351 367 ntBASIC5.61□□□□□ -1.51
VARS2Q5ST30 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VARS2Q5ST30 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.61□□□□□ -1.51
VARS2Q5ST30 RNU6-504P-201ENST00000516568 104 ntBASIC5.61□□□□□ -1.51
VARS2Q5ST30 MIR7641-1-201ENST00000627518 61 ntBASIC5.61□□□□□ -1.51
VARS2Q5ST30 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VARS2Q5ST30 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.61□□□□□ -1.51
VARS2Q5ST30 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VARS2Q5ST30 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VARS2Q5ST30 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VARS2Q5ST30 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VARS2Q5ST30 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.6□□□□□ -1.51
VARS2Q5ST30 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VARS2Q5ST30 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VARS2Q5ST30 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.6□□□□□ -1.51
VARS2Q5ST30 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.6□□□□□ -1.51
VARS2Q5ST30 AL589743.1-201ENST00000551932 2712 ntBASIC5.6□□□□□ -1.51
VARS2Q5ST30 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
VARS2Q5ST30 CBX3P9-201ENST00000402326 552 ntBASIC5.6□□□□□ -1.51
VARS2Q5ST30 AL590004.2-201ENST00000404787 371 ntBASIC5.6□□□□□ -1.51
VARS2Q5ST30 SNORA19.1-201ENST00000410656 129 ntBASIC5.6□□□□□ -1.51
VARS2Q5ST30 AC126124.2-201ENST00000413542 321 ntBASIC5.6□□□□□ -1.51
VARS2Q5ST30 ANP32BP2-201ENST00000454525 545 ntBASIC5.6□□□□□ -1.51
VARS2Q5ST30 RN7SL385P-201ENST00000468873 276 ntBASIC5.6□□□□□ -1.51
VARS2Q5ST30 RN7SKP277-201ENST00000516895 283 ntBASIC5.6□□□□□ -1.51
VARS2Q5ST30 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.6□□□□□ -1.51
VARS2Q5ST30 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.6□□□□□ -1.51
VARS2Q5ST30 ARF4P1-201ENST00000605447 541 ntBASIC5.6□□□□□ -1.51
VARS2Q5ST30 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VARS2Q5ST30 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.6□□□□□ -1.51
VARS2Q5ST30 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.6□□□□□ -1.51
VARS2Q5ST30 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
VARS2Q5ST30 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
VARS2Q5ST30 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
VARS2Q5ST30 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VARS2Q5ST30 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VARS2Q5ST30 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VARS2Q5ST30 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
VARS2Q5ST30 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VARS2Q5ST30 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VARS2Q5ST30 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.59□□□□□ -1.51
VARS2Q5ST30 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VARS2Q5ST30 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VARS2Q5ST30 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
VARS2Q5ST30 SNURFL-201ENST00000309296 343 ntBASIC5.59□□□□□ -1.51
VARS2Q5ST30 MIR133A2-201ENST00000347538 102 ntBASIC5.59□□□□□ -1.51
VARS2Q5ST30 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VARS2Q5ST30 Y_RNA.78-201ENST00000362970 110 ntBASIC5.59□□□□□ -1.51
VARS2Q5ST30 Y_RNA.107-201ENST00000363190 121 ntBASIC5.59□□□□□ -1.51
VARS2Q5ST30 RNU6-242P-201ENST00000384359 107 ntBASIC5.59□□□□□ -1.51
VARS2Q5ST30 SNORA66-201ENST00000384792 133 ntBASIC5.59□□□□□ -1.51
VARS2Q5ST30 CALM2P4-201ENST00000430810 426 ntBASIC5.59□□□□□ -1.51
VARS2Q5ST30 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.59□□□□□ -1.51
VARS2Q5ST30 AL021397.1-201ENST00000451806 248 ntBASIC5.59□□□□□ -1.51
VARS2Q5ST30 RNU6-893P-201ENST00000458841 100 ntBASIC5.59□□□□□ -1.51
VARS2Q5ST30 AC091153.1-201ENST00000466297 402 ntBASIC5.59□□□□□ -1.51
VARS2Q5ST30 HSPE1P6-201ENST00000479457 291 ntBASIC5.59□□□□□ -1.51
VARS2Q5ST30 BNIP3P1-201ENST00000547295 580 ntBASIC5.59□□□□□ -1.51
VARS2Q5ST30 AL160236.1-201ENST00000556317 195 ntBASIC5.59□□□□□ -1.51
VARS2Q5ST30 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
VARS2Q5ST30 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VARS2Q5ST30 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.59□□□□□ -1.51
VARS2Q5ST30 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VARS2Q5ST30 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
VARS2Q5ST30 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
VARS2Q5ST30 AL138820.1-201ENST00000617901 5305 ntBASIC5.59□□□□□ -1.51
VARS2Q5ST30 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VARS2Q5ST30 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.59□□□□□ -1.52
VARS2Q5ST30 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
VARS2Q5ST30 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
VARS2Q5ST30 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
VARS2Q5ST30 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VARS2Q5ST30 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.58□□□□□ -1.52
VARS2Q5ST30 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.58□□□□□ -1.52
VARS2Q5ST30 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.58□□□□□ -1.52
VARS2Q5ST30 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.58□□□□□ -1.52
VARS2Q5ST30 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VARS2Q5ST30 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VARS2Q5ST30 RN7SKP185-201ENST00000362813 326 ntBASIC5.58□□□□□ -1.52
VARS2Q5ST30 RNU6-727P-201ENST00000363592 107 ntBASIC5.58□□□□□ -1.52
VARS2Q5ST30 RNU6-497P-201ENST00000365316 104 ntBASIC5.58□□□□□ -1.52
VARS2Q5ST30 MIR192-201ENST00000384915 110 ntBASIC5.58□□□□□ -1.52
VARS2Q5ST30 SNORA48.5-201ENST00000391143 135 ntBASIC5.58□□□□□ -1.52
VARS2Q5ST30 MIR1182-201ENST00000408363 97 ntBASIC5.58□□□□□ -1.52
VARS2Q5ST30 RNU6-712P-201ENST00000410558 100 ntBASIC5.58□□□□□ -1.52
VARS2Q5ST30 RNA5SP136-201ENST00000410906 107 ntBASIC5.58□□□□□ -1.52
VARS2Q5ST30 AC091390.3-201ENST00000426478 338 ntBASIC5.58□□□□□ -1.52
VARS2Q5ST30 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.58□□□□□ -1.52
VARS2Q5ST30 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.58□□□□□ -1.52
VARS2Q5ST30 AL354710.1-201ENST00000453641 246 ntBASIC5.58□□□□□ -1.52
VARS2Q5ST30 AC016632.1-201ENST00000503994 196 ntBASIC5.58□□□□□ -1.52
VARS2Q5ST30 RNU6-1018P-201ENST00000516577 106 ntBASIC5.58□□□□□ -1.52
VARS2Q5ST30 AC107016.1-201ENST00000550463 337 ntBASIC5.58□□□□□ -1.52
VARS2Q5ST30 MIR4662A-201ENST00000637499 67 ntBASIC5.58□□□□□ -1.52
VARS2Q5ST30 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms