Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.76□□□□□ -2.29
NUP188Q5SRE5 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.76□□□□□ -2.29
NUP188Q5SRE5 HMGB1P35-201ENST00000503360 598 ntBASIC0.76□□□□□ -2.29
NUP188Q5SRE5 SNORA62.5-201ENST00000516634 120 ntBASIC0.76□□□□□ -2.29
NUP188Q5SRE5 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.76□□□□□ -2.29
NUP188Q5SRE5 MIR4653-201ENST00000585107 83 ntBASIC0.76□□□□□ -2.29
NUP188Q5SRE5 AP000254.1-201ENST00000609934 520 ntBASIC0.76□□□□□ -2.29
NUP188Q5SRE5 RNU6-1164P-201ENST00000364428 107 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 SNORA22-201ENST00000383907 134 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 SNORA22C-201ENST00000384614 134 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AL589655.1-201ENST00000405398 482 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AC004865.1-201ENST00000442276 1003 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.75□□□□□ -2.29
NUP188Q5SRE5 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
NUP188Q5SRE5 RNA5SP137-201ENST00000516833 135 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AC022616.2-201ENST00000523185 300 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AC010620.1-201ENST00000601088 1102 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AP000403.1-201ENST00000603349 851 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AC010738.1-201ENST00000604970 987 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AC008945.2-201ENST00000606056 604 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AC024595.1-201ENST00000623088 387 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
NUP188Q5SRE5 RNU6-1155P-201ENST00000363554 107 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 MIR1912-201ENST00000410389 80 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 RPL36P19-201ENST00000430744 301 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.75□□□□□ -2.29
NUP188Q5SRE5 RPS27P23-201ENST00000487608 251 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.75□□□□□ -2.29
NUP188Q5SRE5 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
NUP188Q5SRE5 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.75□□□□□ -2.29
NUP188Q5SRE5 AC018638.7-201ENST00000605836 1114 ntBASIC0.75□□□□□ -2.29
NUP188Q5SRE5 RNU6-288P-201ENST00000363690 104 ntBASIC0.74□□□□□ -2.29
NUP188Q5SRE5 APOOP3-201ENST00000536787 586 ntBASIC0.74□□□□□ -2.29
NUP188Q5SRE5 AC105224.1-201ENST00000587055 421 ntBASIC0.74□□□□□ -2.29
NUP188Q5SRE5 AL355802.3-201ENST00000607571 545 ntBASIC0.74□□□□□ -2.29
NUP188Q5SRE5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.74□□□□□ -2.29
NUP188Q5SRE5 RNU6-31P-201ENST00000384388 108 ntBASIC0.73□□□□□ -2.29
NUP188Q5SRE5 SNORA8-201ENST00000384574 139 ntBASIC0.73□□□□□ -2.29
NUP188Q5SRE5 MIR561-201ENST00000385216 97 ntBASIC0.73□□□□□ -2.29
NUP188Q5SRE5 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.73□□□□□ -2.29
NUP188Q5SRE5 FO393419.3-201ENST00000428741 282 ntBASIC0.73□□□□□ -2.29
NUP188Q5SRE5 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.73□□□□□ -2.29
NUP188Q5SRE5 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.73□□□□□ -2.29
NUP188Q5SRE5 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.73□□□□□ -2.29
NUP188Q5SRE5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.73□□□□□ -2.29
NUP188Q5SRE5 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.73□□□□□ -2.29
NUP188Q5SRE5 MTCYBP16-201ENST00000509187 1129 ntBASIC0.73□□□□□ -2.29
NUP188Q5SRE5 RNA5SP165-201ENST00000517142 115 ntBASIC0.73□□□□□ -2.29
NUP188Q5SRE5 AP003497.1-201ENST00000528472 562 ntBASIC0.73□□□□□ -2.29
NUP188Q5SRE5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.73□□□□□ -2.29
NUP188Q5SRE5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.73□□□□□ -2.29
NUP188Q5SRE5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.73□□□□□ -2.29
NUP188Q5SRE5 MIR4514-201ENST00000581410 57 ntBASIC0.73□□□□□ -2.29
NUP188Q5SRE5 MIR4636-201ENST00000582271 80 ntBASIC0.73□□□□□ -2.29
NUP188Q5SRE5 AC006213.4-201ENST00000616184 634 ntBASIC0.73□□□□□ -2.29
NUP188Q5SRE5 AC099842.1-201ENST00000619919 596 ntBASIC0.73□□□□□ -2.29
NUP188Q5SRE5 AL356585.4-201ENST00000623078 1229 ntBASIC0.73□□□□□ -2.29
NUP188Q5SRE5 MIR338-201ENST00000636369 67 ntBASIC0.73□□□□□ -2.29
NUP188Q5SRE5 AL049641.1-201ENST00000441055 1948 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 RNU6-105P-201ENST00000363909 104 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 RNU6-1187P-201ENST00000364771 110 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 RNU6-750P-201ENST00000390946 107 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 RNU6-233P-201ENST00000410845 141 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.72□□□□□ -2.29
NUP188Q5SRE5 HMGN2P9-201ENST00000476875 229 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.72□□□□□ -2.29
NUP188Q5SRE5 RNA5SP112-201ENST00000515937 99 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 RNA5SP285-201ENST00000516619 119 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 OR5AK1P-201ENST00000524837 922 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 OR5B19P-201ENST00000531766 928 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 AL356432.3-201ENST00000568952 465 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 AC025588.3-201ENST00000604182 274 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 HMGB1P51-201ENST00000605166 638 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 AC135803.1-201ENST00000608748 565 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 AC110792.4-201ENST00000609843 298 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 MIR5739-201ENST00000619803 80 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 TAF9BP2-201ENST00000400856 499 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.72□□□□□ -2.29
NUP188Q5SRE5 AC024082.2-201ENST00000434771 238 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 AL049734.2-201ENST00000441066 616 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.72□□□□□ -2.29
NUP188Q5SRE5 RNU6-27P-201ENST00000516146 107 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 AL391261.3-201ENST00000557194 520 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 AL138478.1-201ENST00000612252 832 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 AC073968.1-201ENST00000618594 637 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 AC018926.3-201ENST00000618841 406 ntBASIC0.72□□□□□ -2.29
NUP188Q5SRE5 MIR218-1-201ENST00000384999 110 ntBASIC0.71□□□□□ -2.3
NUP188Q5SRE5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.71□□□□□ -2.3
NUP188Q5SRE5 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.71□□□□□ -2.3
NUP188Q5SRE5 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.71□□□□□ -2.3
NUP188Q5SRE5 AC073614.1-201ENST00000438690 650 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms