Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC087045.1-201ENST00000605856 382 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 uc_338.1-201ENST00000612113 180 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 AC090517.2-201ENST00000614966 680 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 uc_338.34-201ENST00000617467 174 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 FER-210ENST00000628534 558 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC38Q502W7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC38Q502W7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC38Q502W7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC38Q502W7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC38Q502W7 Y_RNA.333-201ENST00000365274 102 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC38Q502W7 MIR34A-201ENST00000385130 110 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 MIR548F1-201ENST00000408667 84 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 RNU6-908P-201ENST00000410160 94 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 RNU6-607P-201ENST00000411283 108 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC38Q502W7 EIF1P1-201ENST00000421436 341 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 RPS3AP44-201ENST00000425466 790 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC38Q502W7 UBE2V1P8-201ENST00000437166 265 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC38Q502W7 BTF3P15-201ENST00000455606 336 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC38Q502W7 FAM92A1P2-202ENST00000504766 877 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 AC074344.1-201ENST00000512823 224 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 RNU4-29P-201ENST00000515943 174 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 RNA5SP217-201ENST00000515959 91 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 MIR892C-201ENST00000516410 77 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 RN7SKP282-201ENST00000516824 299 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 SNORD19.2-201ENST00000516978 73 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC38Q502W7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC38Q502W7 BNIP3P6-201ENST00000549284 499 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC38Q502W7 MTCO3P23-201ENST00000561363 289 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC38Q502W7 AC092325.1-201ENST00000566449 554 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 LRRC37A5P-203ENST00000580181 585 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC38Q502W7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.36□□□□□ -1.87
CCDC38Q502W7 AL355877.2-201ENST00000603670 358 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 AL162713.1-201ENST00000604480 262 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 RMST_4.1-201ENST00000616886 107 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CCDC38Q502W7 CDC27P3-201ENST00000635418 1910 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 AC093831.2-201ENST00000624393 3427 ntBASIC3.36□□□□□ -1.87
CCDC38Q502W7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC38Q502W7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC38Q502W7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC38Q502W7 AP003122.5-201ENST00000527668 3766 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 RNU1-70P-201ENST00000362618 164 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 U3.6-201ENST00000363622 211 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 RNU6-898P-201ENST00000365627 104 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 Y_RNA.399-201ENST00000383955 105 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 MIR518D-201ENST00000385014 87 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 SNORA16.2-201ENST00000390991 127 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 AL353678.1-201ENST00000422735 741 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC38Q502W7 RPL21P2-201ENST00000440049 481 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC38Q502W7 NIPA2P5-201ENST00000452282 464 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC38Q502W7 AC011005.2-201ENST00000487324 359 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 MTAPP1-201ENST00000489154 819 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC38Q502W7 AC011352.1-201ENST00000512300 793 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC38Q502W7 RNU2-69P-201ENST00000516061 100 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 RNU1-86P-201ENST00000516108 154 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 RNU1-107P-201ENST00000516617 154 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 SNORD60.2-201ENST00000516883 86 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC38Q502W7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC38Q502W7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC38Q502W7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC38Q502W7 AL138976.2-201ENST00000563989 694 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 MIR3941-201ENST00000582572 103 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 SRGNP1-201ENST00000603392 451 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC38Q502W7 AC002064.3-201ENST00000623448 346 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 AC022418.1-201ENST00000624118 445 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC38Q502W7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC38Q502W7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC38Q502W7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCDC38Q502W7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC38Q502W7 AC093536.2-201ENST00000565257 1406 ntBASIC3.35□□□□□ -1.87
CCDC38Q502W7 AC010889.1-201ENST00000566193 2666 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 MIR208A-201ENST00000362287 71 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 RNA5SP119-201ENST00000362715 117 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 RNU6-1090P-201ENST00000364065 94 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 RNU6-384P-201ENST00000364900 104 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 MIR10A-201ENST00000385043 110 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms