Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNU6-1164P-201ENST00000364428 107 ntBASIC0.82□□□□□ -2.28
CCDC58Q4VC31 RNU6-619P-201ENST00000365146 108 ntBASIC0.82□□□□□ -2.28
CCDC58Q4VC31 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CCDC58Q4VC31 RN7SKP284-201ENST00000411002 343 ntBASIC0.82□□□□□ -2.28
CCDC58Q4VC31 UBE2V1P11-201ENST00000411559 285 ntBASIC0.82□□□□□ -2.28
CCDC58Q4VC31 AC245047.4-201ENST00000433189 144 ntBASIC0.82□□□□□ -2.28
CCDC58Q4VC31 DUXAP8-207ENST00000456786 622 ntBASIC0.82□□□□□ -2.28
CCDC58Q4VC31 AC112771.1-201ENST00000463581 102 ntBASIC0.82□□□□□ -2.28
CCDC58Q4VC31 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC58Q4VC31 SNORA31.17-201ENST00000516953 127 ntBASIC0.82□□□□□ -2.28
CCDC58Q4VC31 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC58Q4VC31 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC58Q4VC31 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC58Q4VC31 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC58Q4VC31 LARP7P2-201ENST00000575306 125 ntBASIC0.82□□□□□ -2.28
CCDC58Q4VC31 AC098826.3-201ENST00000603823 466 ntBASIC0.82□□□□□ -2.28
CCDC58Q4VC31 AC004853.1-201ENST00000604902 698 ntBASIC0.82□□□□□ -2.28
CCDC58Q4VC31 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC58Q4VC31 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
CCDC58Q4VC31 RNU6-252P-201ENST00000363232 107 ntBASIC0.81□□□□□ -2.28
CCDC58Q4VC31 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC58Q4VC31 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC58Q4VC31 RPL21P47-201ENST00000483696 477 ntBASIC0.81□□□□□ -2.28
CCDC58Q4VC31 AC109927.2-201ENST00000506416 303 ntBASIC0.81□□□□□ -2.28
CCDC58Q4VC31 RNA5SP290-201ENST00000517133 127 ntBASIC0.81□□□□□ -2.28
CCDC58Q4VC31 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC58Q4VC31 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CCDC58Q4VC31 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC58Q4VC31 AC079148.1-201ENST00000565944 819 ntBASIC0.81□□□□□ -2.28
CCDC58Q4VC31 AC095057.3-201ENST00000567102 1157 ntBASIC0.81□□□□□ -2.28
CCDC58Q4VC31 SNORA77B-201ENST00000578179 125 ntBASIC0.81□□□□□ -2.28
CCDC58Q4VC31 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
CCDC58Q4VC31 AL138713.1-201ENST00000624026 2130 ntBASIC0.81□□□□□ -2.28
CCDC58Q4VC31 AC079416.3-201ENST00000624479 549 ntBASIC0.81□□□□□ -2.28
CCDC58Q4VC31 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
CCDC58Q4VC31 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
CCDC58Q4VC31 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
CCDC58Q4VC31 SNORA29-201ENST00000384183 140 ntBASIC0.8□□□□□ -2.28
CCDC58Q4VC31 RNA5SP213-201ENST00000391031 106 ntBASIC0.8□□□□□ -2.28
CCDC58Q4VC31 RNU2-48P-201ENST00000410694 191 ntBASIC0.8□□□□□ -2.28
CCDC58Q4VC31 AC139712.2-201ENST00000424302 339 ntBASIC0.8□□□□□ -2.28
CCDC58Q4VC31 AC093422.3-201ENST00000428506 305 ntBASIC0.8□□□□□ -2.28
CCDC58Q4VC31 AC027119.1-201ENST00000440877 241 ntBASIC0.8□□□□□ -2.28
CCDC58Q4VC31 PGBD4P5-201ENST00000445958 426 ntBASIC0.8□□□□□ -2.28
CCDC58Q4VC31 AL050341.1-201ENST00000447743 313 ntBASIC0.8□□□□□ -2.28
CCDC58Q4VC31 RPL9P9-202ENST00000466501 579 ntBASIC0.8□□□□□ -2.28
CCDC58Q4VC31 MTCO2P15-201ENST00000532655 656 ntBASIC0.8□□□□□ -2.28
CCDC58Q4VC31 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC58Q4VC31 LINC00557-201ENST00000563184 1279 ntBASIC0.8□□□□□ -2.28
CCDC58Q4VC31 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.8□□□□□ -2.28
CCDC58Q4VC31 AC073544.2-201ENST00000601155 540 ntBASIC0.8□□□□□ -2.28
CCDC58Q4VC31 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.8□□□□□ -2.28
CCDC58Q4VC31 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC58Q4VC31 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC58Q4VC31 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC58Q4VC31 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.8□□□□□ -2.28
CCDC58Q4VC31 MTCO1P9-201ENST00000505577 1534 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 RNU4-51P-201ENST00000364206 140 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 SNORD1A-201ENST00000364968 72 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 MIR16-1-201ENST00000385271 89 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 MIR1267-201ENST00000408723 78 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 AC069282.1-201ENST00000411911 526 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 AL592310.1-201ENST00000414330 671 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 NCOR1P3-201ENST00000420479 303 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 AL451054.2-201ENST00000420896 202 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 UBE2V2P3-201ENST00000433562 437 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 AL121890.1-201ENST00000435457 205 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC58Q4VC31 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC58Q4VC31 PRELID3BP1-201ENST00000457142 540 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 YWHAEP4-201ENST00000505390 198 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 AC103851.1-201ENST00000506833 274 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC58Q4VC31 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC58Q4VC31 AC087045.1-201ENST00000605856 382 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 AL020996.3-201ENST00000606617 222 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC58Q4VC31 HAUS6P2-201ENST00000433254 2404 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 SGO1P1-201ENST00000603525 1447 ntBASIC0.79□□□□□ -2.28
CCDC58Q4VC31 HSBP1P2-201ENST00000299671 229 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 RNU1-124P-201ENST00000363861 145 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 RNU6-1032P-201ENST00000384100 107 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CCDC58Q4VC31 POLR2J4-204ENST00000418424 324 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 CR848007.2-201ENST00000424918 787 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 AL591806.2-201ENST00000433122 173 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 RPS4XP11-201ENST00000446897 772 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 RPS27P1-201ENST00000450552 247 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 AC114982.1-201ENST00000469402 321 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 AC079140.2-201ENST00000506193 142 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 PTP4A1P4-201ENST00000512479 322 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 RNVU1-2-201ENST00000516326 135 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 RNU6-528P-201ENST00000516926 100 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.78□□□□□ -2.28
CCDC58Q4VC31 AP000763.2-201ENST00000540641 163 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC0.78□□□□□ -2.28
CCDC58Q4VC31 AL355598.1-201ENST00000604169 202 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 AC211469.2-201ENST00000605461 205 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 AC123912.5-201ENST00000605470 343 ntBASIC0.78□□□□□ -2.28
CCDC58Q4VC31 MIR8063-201ENST00000621930 81 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms