Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL109809.4-201ENST00000603520 2185 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 AC104763.2-201ENST00000604179 382 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 AL359999.1-201ENST00000604513 294 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 AC007938.3-201ENST00000604965 623 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RFX4Q33E94 AL589743.7-201ENST00000612637 233 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.04□□□□□ -2.08
RFX4Q33E94 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.04□□□□□ -2.08
RFX4Q33E94 AL603755.1-201ENST00000619504 163 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
RFX4Q33E94 Z99571.1-201ENST00000636677 394 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 AC080128.1-201ENST00000474389 1917 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
RFX4Q33E94 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RFX4Q33E94 RNU6-960P-201ENST00000364056 120 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 Z98749.2-208ENST00000381646 500 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 RNU5A-2P-201ENST00000384337 116 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 RNU6-658P-201ENST00000384606 106 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 RNU6-220P-201ENST00000390919 107 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.03□□□□□ -2.08
RFX4Q33E94 SRIP2-201ENST00000428470 166 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 MED14P1-201ENST00000430517 648 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RFX4Q33E94 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.03□□□□□ -2.08
RFX4Q33E94 TRBV1-201ENST00000476502 284 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 AC126389.1-201ENST00000477436 290 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 RN7SL636P-201ENST00000497504 294 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 RNU2-10P-201ENST00000516375 211 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 RNU2-46P-201ENST00000517038 113 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 AP003122.3-201ENST00000526316 255 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 AC084851.1-201ENST00000529105 249 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 OR5B19P-201ENST00000531766 928 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.03□□□□□ -2.08
RFX4Q33E94 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.03□□□□□ -2.08
RFX4Q33E94 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.03□□□□□ -2.08
RFX4Q33E94 AC005261.5-201ENST00000596280 355 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 AP002360.4-201ENST00000606980 481 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 AC022893.3-201ENST00000607665 437 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.03□□□□□ -2.08
RFX4Q33E94 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.03□□□□□ -2.08
RFX4Q33E94 AC009090.3-201ENST00000616553 565 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 AL449363.1-201ENST00000617815 186 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 MIR6132-201ENST00000622083 109 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 AL603839.4-201ENST00000624658 1005 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 CTSLP2-204ENST00000629029 392 ntBASIC2.03□□□□□ -2.08
RFX4Q33E94 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RFX4Q33E94 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RFX4Q33E94 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.03□□□□□ -2.09
RFX4Q33E94 AC010889.1-201ENST00000566193 2666 ntBASIC2.03□□□□□ -2.09
RFX4Q33E94 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RFX4Q33E94 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.02□□□□□ -2.09
RFX4Q33E94 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
RFX4Q33E94 MTND4P27-201ENST00000450813 1354 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.02□□□□□ -2.09
RFX4Q33E94 NACAP2-201ENST00000318548 624 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 SNORD56.2-201ENST00000363242 71 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 SNORA4.3-201ENST00000365564 137 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 SNORA67.4-201ENST00000384688 142 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 MT-TH-201ENST00000387441 69 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 RPL17P50-201ENST00000396131 546 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 AL355497.1-201ENST00000406262 551 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.02□□□□□ -2.09
RFX4Q33E94 OR51A5P-201ENST00000415429 942 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 NPM1P11-201ENST00000417106 855 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 AC009963.1-201ENST00000417265 157 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.02□□□□□ -2.09
RFX4Q33E94 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.02□□□□□ -2.09
RFX4Q33E94 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.02□□□□□ -2.09
RFX4Q33E94 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.02□□□□□ -2.09
RFX4Q33E94 AC007560.1-201ENST00000426912 237 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 HMGB1P9-201ENST00000429856 646 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.02□□□□□ -2.09
RFX4Q33E94 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.02□□□□□ -2.09
RFX4Q33E94 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.02□□□□□ -2.09
RFX4Q33E94 AL022238.1-201ENST00000442557 355 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 HMGN2P10-201ENST00000448085 265 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 RPL23AP7-203ENST00000449021 469 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 RPL37P6-201ENST00000460682 294 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 AC007182.2-201ENST00000489251 402 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.02□□□□□ -2.09
RFX4Q33E94 SNORA31.6-201ENST00000516241 130 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 RNU6-914P-201ENST00000516749 109 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 MTCYBP20-201ENST00000524239 1129 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 AC021739.1-201ENST00000559631 174 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.02□□□□□ -2.09
RFX4Q33E94 AC012414.6-201ENST00000568241 401 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 AC024619.4-201ENST00000580924 316 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 MIR5002-201ENST00000584713 97 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.02□□□□□ -2.09
RFX4Q33E94 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.02□□□□□ -2.09
RFX4Q33E94 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.02□□□□□ -2.09
RFX4Q33E94 AC012360.2-201ENST00000609349 391 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
RFX4Q33E94 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
RFX4Q33E94 AC010329.5-201ENST00000623497 2174 ntBASIC2.02□□□□□ -2.09
RFX4Q33E94 AL136360.1-201ENST00000503377 1900 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
RFX4Q33E94 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms