Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 RNU1-89P-201ENST00000384592 164 ntBASIC4.89□□□□□ -1.63
CCDC27Q2M243 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CCDC27Q2M243 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.89□□□□□ -1.63
CCDC27Q2M243 RN7SKP27-201ENST00000410684 333 ntBASIC4.89□□□□□ -1.63
CCDC27Q2M243 SNORD56-201ENST00000413522 71 ntBASIC4.89□□□□□ -1.63
CCDC27Q2M243 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC27Q2M243 MTCO2P12-201ENST00000427426 682 ntBASIC4.89□□□□□ -1.63
CCDC27Q2M243 HMGN2P20-201ENST00000437531 273 ntBASIC4.89□□□□□ -1.63
CCDC27Q2M243 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC27Q2M243 BTF3P15-201ENST00000455606 336 ntBASIC4.89□□□□□ -1.63
CCDC27Q2M243 Y_RNA.653-201ENST00000459091 95 ntBASIC4.89□□□□□ -1.63
CCDC27Q2M243 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.89□□□□□ -1.63
CCDC27Q2M243 RNU6-1153P-201ENST00000516760 105 ntBASIC4.89□□□□□ -1.63
CCDC27Q2M243 AC109479.2-201ENST00000517842 174 ntBASIC4.89□□□□□ -1.63
CCDC27Q2M243 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC27Q2M243 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC27Q2M243 CYCSP39-201ENST00000565821 309 ntBASIC4.89□□□□□ -1.63
CCDC27Q2M243 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC27Q2M243 PISRT1.1-201ENST00000616930 107 ntBASIC4.89□□□□□ -1.63
CCDC27Q2M243 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CCDC27Q2M243 U6.98-201ENST00000637157 84 ntBASIC4.89□□□□□ -1.63
CCDC27Q2M243 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC27Q2M243 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC27Q2M243 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC27Q2M243 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC27Q2M243 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CCDC27Q2M243 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC27Q2M243 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC27Q2M243 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC27Q2M243 RNU6-1188P-201ENST00000363795 107 ntBASIC4.88□□□□□ -1.63
CCDC27Q2M243 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC27Q2M243 RNU6-1304P-201ENST00000411374 106 ntBASIC4.88□□□□□ -1.63
CCDC27Q2M243 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC27Q2M243 RPS15AP10-201ENST00000432472 382 ntBASIC4.88□□□□□ -1.63
CCDC27Q2M243 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC27Q2M243 AL159987.2-201ENST00000432754 307 ntBASIC4.88□□□□□ -1.63
CCDC27Q2M243 SSXP4-201ENST00000451349 245 ntBASIC4.88□□□□□ -1.63
CCDC27Q2M243 RNU7-187P-201ENST00000458985 68 ntBASIC4.88□□□□□ -1.63
CCDC27Q2M243 snoU109.2-201ENST00000459316 135 ntBASIC4.88□□□□□ -1.63
CCDC27Q2M243 RPL23AP45-201ENST00000476406 468 ntBASIC4.88□□□□□ -1.63
CCDC27Q2M243 AC018437.1-201ENST00000492214 406 ntBASIC4.88□□□□□ -1.63
CCDC27Q2M243 Y_RNA.687-201ENST00000516558 91 ntBASIC4.88□□□□□ -1.63
CCDC27Q2M243 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC27Q2M243 TRMT10BP1-201ENST00000519377 943 ntBASIC4.88□□□□□ -1.63
CCDC27Q2M243 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC27Q2M243 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC27Q2M243 NACAP3-201ENST00000552100 481 ntBASIC4.88□□□□□ -1.63
CCDC27Q2M243 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC27Q2M243 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC27Q2M243 BRDTP1-201ENST00000605735 677 ntBASIC4.88□□□□□ -1.63
CCDC27Q2M243 AL627309.6-201ENST00000606857 840 ntBASIC4.88□□□□□ -1.63
CCDC27Q2M243 AL161629.2-201ENST00000615347 275 ntBASIC4.88□□□□□ -1.63
CCDC27Q2M243 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC27Q2M243 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC27Q2M243 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC27Q2M243 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC27Q2M243 AC007256.1-201ENST00000392253 2765 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 RNU1-18P-201ENST00000363062 164 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 RNU5E-7P-201ENST00000365290 117 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CCDC27Q2M243 RNU6-72P-201ENST00000384285 79 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 Y_RNA.579-201ENST00000390939 94 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CCDC27Q2M243 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC27Q2M243 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC27Q2M243 HIGD1AP11-201ENST00000438361 280 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 NOTCH2P1-201ENST00000443481 624 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 Y_RNA.708-201ENST00000516950 96 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 AC023632.4-201ENST00000517783 191 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC27Q2M243 AC107016.1-201ENST00000550463 337 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 AL121821.2-201ENST00000556081 394 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC27Q2M243 AC034105.4-201ENST00000568304 277 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC27Q2M243 AL121917.1-203ENST00000605534 577 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 AC124303.1-201ENST00000605703 360 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 AC019193.3-201ENST00000609144 554 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 AL138880.2-201ENST00000616214 239 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 AC007742.2-201ENST00000618226 398 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 XIST_intron.1-201ENST00000619444 68 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 AC090971.5-201ENST00000621102 293 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 AC244517.12-201ENST00000623581 663 ntBASIC4.87□□□□□ -1.63
CCDC27Q2M243 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC27Q2M243 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCDC27Q2M243 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC27Q2M243 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC27Q2M243 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC27Q2M243 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC27Q2M243 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC27Q2M243 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC27Q2M243 RNU6-306P-201ENST00000384617 107 ntBASIC4.86□□□□□ -1.63
CCDC27Q2M243 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCDC27Q2M243 U3.37-201ENST00000408528 213 ntBASIC4.86□□□□□ -1.63
CCDC27Q2M243 RN7SKP202-201ENST00000410439 330 ntBASIC4.86□□□□□ -1.63
CCDC27Q2M243 RNA5SP31-201ENST00000411144 127 ntBASIC4.86□□□□□ -1.63
CCDC27Q2M243 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC27Q2M243 AF228730.4-201ENST00000421457 183 ntBASIC4.86□□□□□ -1.63
CCDC27Q2M243 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms