Protein–RNA interactions for Protein: Q16518

RPE65, Retinoid isomerohydrolase, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPE65Q16518 AC022418.1-201ENST00000624118 445 ntBASIC3.14□□□□□ -1.91
RPE65Q16518 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RPE65Q16518 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPE65Q16518 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPE65Q16518 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RPE65Q16518 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPE65Q16518 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPE65Q16518 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
RPE65Q16518 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.13□□□□□ -1.91
RPE65Q16518 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RPE65Q16518 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
RPE65Q16518 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RPE65Q16518 Y_RNA.72-201ENST00000362894 103 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 Y_RNA.100-201ENST00000363141 102 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 Y_RNA.373-201ENST00000365600 103 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RPE65Q16518 Y_RNA.399-201ENST00000383955 105 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RPE65Q16518 AL162578.1-201ENST00000406202 378 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 RNU6-1077P-201ENST00000410506 102 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 Y_RNA.615-201ENST00000410769 117 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 POLHP1-201ENST00000411806 470 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AC138393.2-201ENST00000414742 246 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 BX682237.1-201ENST00000415016 335 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AC007560.1-201ENST00000426912 237 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 NEK4P1-201ENST00000433383 879 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AL353705.1-201ENST00000433468 480 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 RPL23AP83-201ENST00000434984 473 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.13□□□□□ -1.91
RPE65Q16518 HMGN2P20-201ENST00000437531 273 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.13□□□□□ -1.91
RPE65Q16518 AL360271.2-201ENST00000447710 161 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 RPL37P4-201ENST00000448908 268 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AL590639.1-201ENST00000456484 337 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 RNU7-167P-201ENST00000459160 62 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 RN7SL863P-201ENST00000462370 296 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AC010401.1-201ENST00000463867 348 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.13□□□□□ -1.91
RPE65Q16518 HMGN2P13-201ENST00000476476 274 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AC139453.3-201ENST00000493276 369 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AC009901.1-201ENST00000506703 541 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 RNU6-189P-201ENST00000516120 101 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AC025755.1-201ENST00000521306 278 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 OR11H5P-201ENST00000554039 926 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AL121579.1-201ENST00000555129 305 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AL118558.2-201ENST00000556294 238 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AC037471.2-201ENST00000564941 598 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 MIR3200-201ENST00000580767 85 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AC012493.2-201ENST00000595083 291 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AL138880.2-201ENST00000616214 239 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 MIR8057-201ENST00000620957 69 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AL008636.1-201ENST00000625038 1018 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.13□□□□□ -1.91
RPE65Q16518 U6.99-201ENST00000637524 83 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RPE65Q16518 AC007496.3-201ENST00000624987 3443 ntBASIC3.13□□□□□ -1.91
RPE65Q16518 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RPE65Q16518 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.13□□□□□ -1.91
RPE65Q16518 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RPE65Q16518 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.12□□□□□ -1.91
RPE65Q16518 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
RPE65Q16518 MIR412-201ENST00000362142 91 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.12□□□□□ -1.91
RPE65Q16518 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.12□□□□□ -1.91
RPE65Q16518 RNY3P14-201ENST00000384309 102 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 MIR888-201ENST00000401186 77 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.12□□□□□ -1.91
RPE65Q16518 RPL26P27-201ENST00000414397 437 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 RPL21P111-201ENST00000418453 477 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 AC099548.1-201ENST00000421443 426 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 BX679664.1-201ENST00000434429 253 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.12□□□□□ -1.91
RPE65Q16518 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.12□□□□□ -1.91
RPE65Q16518 DYNLL1P5-201ENST00000467158 270 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 AC022493.1-201ENST00000492984 337 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 SNORA31.1-201ENST00000515993 133 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 SNORA31.5-201ENST00000516190 133 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 SNORA20.3-201ENST00000516880 132 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 SNORA31.19-201ENST00000517079 126 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 AC009902.1-201ENST00000519351 183 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.12□□□□□ -1.91
RPE65Q16518 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.12□□□□□ -1.91
RPE65Q16518 AC011712.1-201ENST00000588959 234 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 AC073539.2-201ENST00000597113 165 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 VN1R80P-201ENST00000597126 338 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 AC090617.10-201ENST00000624308 134 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 SNORA50A-202ENST00000629536 136 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.12□□□□□ -1.91
RPE65Q16518 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RPE65Q16518 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RPE65Q16518 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RPE65Q16518 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPE65Q16518 RNA5SP374-201ENST00000362939 125 ntBASIC3.11□□□□□ -1.91
RPE65Q16518 SNORA72.1-201ENST00000363485 129 ntBASIC3.11□□□□□ -1.91
RPE65Q16518 RNU6-884P-201ENST00000363889 107 ntBASIC3.11□□□□□ -1.91
RPE65Q16518 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.11□□□□□ -1.91
RPE65Q16518 Y_RNA.480-201ENST00000384364 102 ntBASIC3.11□□□□□ -1.91
RPE65Q16518 RNA5SP252-201ENST00000391131 119 ntBASIC3.11□□□□□ -1.91
RPE65Q16518 RPL7P10-201ENST00000417407 739 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms