Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.55□□□□□ -2
SCN1BQ07699 RNU6-1097P-201ENST00000363586 107 ntBASIC2.55□□□□□ -2
SCN1BQ07699 RNU6-384P-201ENST00000364900 104 ntBASIC2.55□□□□□ -2
SCN1BQ07699 RNU6-456P-201ENST00000384493 107 ntBASIC2.55□□□□□ -2
SCN1BQ07699 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.55□□□□□ -2
SCN1BQ07699 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.55□□□□□ -2
SCN1BQ07699 AL139095.1-201ENST00000404326 391 ntBASIC2.55□□□□□ -2
SCN1BQ07699 RNA5SP120-201ENST00000410900 112 ntBASIC2.55□□□□□ -2
SCN1BQ07699 OR6C66P-201ENST00000414917 930 ntBASIC2.55□□□□□ -2
SCN1BQ07699 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.55□□□□□ -2
SCN1BQ07699 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
SCN1BQ07699 PGBD4P6-201ENST00000421501 610 ntBASIC2.55□□□□□ -2
SCN1BQ07699 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.55□□□□□ -2
SCN1BQ07699 AC022018.1-201ENST00000430685 241 ntBASIC2.55□□□□□ -2
SCN1BQ07699 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.55□□□□□ -2
SCN1BQ07699 AC098826.1-201ENST00000433943 471 ntBASIC2.55□□□□□ -2
SCN1BQ07699 CALM1P1-201ENST00000442082 433 ntBASIC2.55□□□□□ -2
SCN1BQ07699 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.55□□□□□ -2
SCN1BQ07699 ELL2P3-201ENST00000457883 1602 ntBASIC2.55□□□□□ -2
SCN1BQ07699 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.55□□□□□ -2
SCN1BQ07699 KLF3P2-201ENST00000465138 268 ntBASIC2.55□□□□□ -2
SCN1BQ07699 AC080014.1-201ENST00000496877 1201 ntBASIC2.55□□□□□ -2
SCN1BQ07699 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.55□□□□□ -2
SCN1BQ07699 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.55□□□□□ -2
SCN1BQ07699 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.55□□□□□ -2
SCN1BQ07699 SNORD27.1-201ENST00000516319 72 ntBASIC2.55□□□□□ -2
SCN1BQ07699 Y_RNA.687-201ENST00000516558 91 ntBASIC2.55□□□□□ -2
SCN1BQ07699 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.55□□□□□ -2
SCN1BQ07699 AP002404.1-201ENST00000532005 451 ntBASIC2.55□□□□□ -2
SCN1BQ07699 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.55□□□□□ -2
SCN1BQ07699 AC079598.5-201ENST00000547460 117 ntBASIC2.55□□□□□ -2
SCN1BQ07699 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.55□□□□□ -2
SCN1BQ07699 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.55□□□□□ -2
SCN1BQ07699 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.55□□□□□ -2
SCN1BQ07699 AC025811.1-201ENST00000604312 472 ntBASIC2.55□□□□□ -2
SCN1BQ07699 AC006566.1-201ENST00000608943 513 ntBASIC2.55□□□□□ -2
SCN1BQ07699 MIR7112-201ENST00000616126 65 ntBASIC2.55□□□□□ -2
SCN1BQ07699 AC007318.2-201ENST00000620999 243 ntBASIC2.55□□□□□ -2
SCN1BQ07699 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.55□□□□□ -2
SCN1BQ07699 AC011155.2-201ENST00000623202 216 ntBASIC2.55□□□□□ -2
SCN1BQ07699 RBBP8P1-201ENST00000449447 1844 ntBASIC2.54□□□□□ -2
SCN1BQ07699 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SCN1BQ07699 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.54□□□□□ -2
SCN1BQ07699 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SCN1BQ07699 RNU6-942P-201ENST00000363002 107 ntBASIC2.54□□□□□ -2
SCN1BQ07699 SNORA25.6-201ENST00000364121 118 ntBASIC2.54□□□□□ -2
SCN1BQ07699 RNA5SP267-201ENST00000364893 126 ntBASIC2.54□□□□□ -2
SCN1BQ07699 SNORA7.4-201ENST00000384249 137 ntBASIC2.54□□□□□ -2
SCN1BQ07699 RNY3P9-201ENST00000384727 106 ntBASIC2.54□□□□□ -2
SCN1BQ07699 RNVU1-14-201ENST00000384770 164 ntBASIC2.54□□□□□ -2
SCN1BQ07699 MIR512-1-201ENST00000384913 84 ntBASIC2.54□□□□□ -2
SCN1BQ07699 MIR454-201ENST00000390180 115 ntBASIC2.54□□□□□ -2
SCN1BQ07699 SNORA48.7-201ENST00000391302 135 ntBASIC2.54□□□□□ -2
SCN1BQ07699 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.54□□□□□ -2
SCN1BQ07699 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.54□□□□□ -2
SCN1BQ07699 RPS3AP44-201ENST00000425466 790 ntBASIC2.54□□□□□ -2
SCN1BQ07699 AL358934.1-201ENST00000432346 324 ntBASIC2.54□□□□□ -2
SCN1BQ07699 AC027673.1-201ENST00000456245 405 ntBASIC2.54□□□□□ -2
SCN1BQ07699 RPS29P15-201ENST00000458329 171 ntBASIC2.54□□□□□ -2
SCN1BQ07699 RPL7P49-201ENST00000471402 708 ntBASIC2.54□□□□□ -2
SCN1BQ07699 MTAPP1-201ENST00000489154 819 ntBASIC2.54□□□□□ -2
SCN1BQ07699 AC018437.1-201ENST00000492214 406 ntBASIC2.54□□□□□ -2
SCN1BQ07699 HMGB1P30-201ENST00000492455 606 ntBASIC2.54□□□□□ -2
SCN1BQ07699 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.54□□□□□ -2
SCN1BQ07699 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.54□□□□□ -2
SCN1BQ07699 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.54□□□□□ -2
SCN1BQ07699 RNU1-86P-201ENST00000516108 154 ntBASIC2.54□□□□□ -2
SCN1BQ07699 RNU5B-3P-201ENST00000516601 115 ntBASIC2.54□□□□□ -2
SCN1BQ07699 RNU1-107P-201ENST00000516617 154 ntBASIC2.54□□□□□ -2
SCN1BQ07699 SCARNA13-201ENST00000516672 275 ntBASIC2.54□□□□□ -2
SCN1BQ07699 RNU6-430P-201ENST00000517078 107 ntBASIC2.54□□□□□ -2
SCN1BQ07699 MIR5692A1-201ENST00000580523 69 ntBASIC2.54□□□□□ -2
SCN1BQ07699 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.54□□□□□ -2
SCN1BQ07699 RPS15AP11-201ENST00000594193 385 ntBASIC2.54□□□□□ -2
SCN1BQ07699 BNIP3P30-201ENST00000601184 574 ntBASIC2.54□□□□□ -2
SCN1BQ07699 RNU6-91P-201ENST00000607774 107 ntBASIC2.54□□□□□ -2
SCN1BQ07699 AC022079.1-201ENST00000621546 602 ntBASIC2.54□□□□□ -2
SCN1BQ07699 AL035425.3-201ENST00000564206 4996 ntBASIC2.54□□□□□ -2
SCN1BQ07699 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SCN1BQ07699 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SCN1BQ07699 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.54□□□□□ -2
SCN1BQ07699 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SCN1BQ07699 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SCN1BQ07699 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
SCN1BQ07699 AC073346.2-201ENST00000624724 2058 ntBASIC2.53□□□□□ -2
SCN1BQ07699 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SCN1BQ07699 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.53□□□□□ -2
SCN1BQ07699 SNORA71.3-201ENST00000362582 128 ntBASIC2.53□□□□□ -2
SCN1BQ07699 RNU6-1287P-201ENST00000362914 107 ntBASIC2.53□□□□□ -2
SCN1BQ07699 RNU6-181P-201ENST00000363225 107 ntBASIC2.53□□□□□ -2
SCN1BQ07699 RNA5SP393-201ENST00000363423 117 ntBASIC2.53□□□□□ -2
SCN1BQ07699 RNU6-371P-201ENST00000364283 108 ntBASIC2.53□□□□□ -2
SCN1BQ07699 DEFA7P-201ENST00000382676 285 ntBASIC2.53□□□□□ -2
SCN1BQ07699 RNU6-348P-201ENST00000384386 107 ntBASIC2.53□□□□□ -2
SCN1BQ07699 RNU6-1060P-201ENST00000384664 107 ntBASIC2.53□□□□□ -2
SCN1BQ07699 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.53□□□□□ -2
SCN1BQ07699 RNU6-550P-201ENST00000391057 101 ntBASIC2.53□□□□□ -2
SCN1BQ07699 PIGFP2-201ENST00000421400 651 ntBASIC2.53□□□□□ -2
SCN1BQ07699 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.53□□□□□ -2
SCN1BQ07699 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms