Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AC015720.1-201ENST00000565251 277 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 MIR4255-201ENST00000579351 72 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 MIR3683-201ENST00000580847 82 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 AC006270.3-201ENST00000605967 1036 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 AC090186.1-201ENST00000605991 572 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 AC106052.1-201ENST00000608029 497 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.37□□□□□ -2.19
HOXC5Q00444 AC099654.9-201ENST00000637055 678 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.37□□□□□ -2.19
HOXC5Q00444 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.37□□□□□ -2.19
HOXC5Q00444 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.37□□□□□ -2.19
HOXC5Q00444 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HOXC5Q00444 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HOXC5Q00444 AC008555.8-201ENST00000623602 2168 ntBASIC1.37□□□□□ -2.19
HOXC5Q00444 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.36□□□□□ -2.19
HOXC5Q00444 SNORA63.3-201ENST00000362682 132 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 AL359634.1-202ENST00000404721 284 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 MIR1302-8-201ENST00000408342 128 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 USP9YP6-201ENST00000413550 854 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.36□□□□□ -2.19
HOXC5Q00444 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.36□□□□□ -2.19
HOXC5Q00444 AL953862.1-201ENST00000423016 168 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 AL513185.2-201ENST00000425543 193 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 AL354695.1-201ENST00000427935 228 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 RPS15AP9-201ENST00000439856 381 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.36□□□□□ -2.19
HOXC5Q00444 snoU109.1-201ENST00000459339 135 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 AC018437.1-201ENST00000492214 406 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 RNA5SP61-201ENST00000516453 100 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 RNU6-678P-201ENST00000516832 109 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 AC034114.1-201ENST00000520293 285 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 DUXAP5-201ENST00000529668 529 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.36□□□□□ -2.19
HOXC5Q00444 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.36□□□□□ -2.19
HOXC5Q00444 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.36□□□□□ -2.19
HOXC5Q00444 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.36□□□□□ -2.19
HOXC5Q00444 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.36□□□□□ -2.19
HOXC5Q00444 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.36□□□□□ -2.19
HOXC5Q00444 VN1R83P-201ENST00000595685 445 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.36□□□□□ -2.19
HOXC5Q00444 AL158827.2-201ENST00000602494 330 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 NDUFA8P1-201ENST00000605525 367 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 AC126118.1-201ENST00000607744 628 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 AC034229.4-201ENST00000607861 441 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 AL773524.1-201ENST00000614065 229 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 AL691447.3-201ENST00000635020 330 ntBASIC1.36□□□□□ -2.19
HOXC5Q00444 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.36□□□□□ -2.19
HOXC5Q00444 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HOXC5Q00444 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HOXC5Q00444 RNU1-42P-201ENST00000364033 160 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 RNU6-188P-201ENST00000364207 107 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 RNU6-1280P-201ENST00000365211 107 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 OR9R1P-201ENST00000412200 877 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 AL158823.1-201ENST00000418441 478 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 AC244636.1-201ENST00000421152 228 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.35□□□□□ -2.19
HOXC5Q00444 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.35□□□□□ -2.19
HOXC5Q00444 SNRPEP7-201ENST00000438350 220 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.35□□□□□ -2.19
HOXC5Q00444 AC116655.1-201ENST00000508324 901 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.35□□□□□ -2.19
HOXC5Q00444 Y_RNA.675-201ENST00000516389 149 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.35□□□□□ -2.19
HOXC5Q00444 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.35□□□□□ -2.19
HOXC5Q00444 AC079598.5-201ENST00000547460 117 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 AC027807.1-201ENST00000559921 996 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.35□□□□□ -2.19
HOXC5Q00444 MTND3P13-201ENST00000574391 343 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 SNORD53B-201ENST00000577887 78 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 AL078605.1-201ENST00000603529 500 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 AL645939.4-201ENST00000604495 135 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.35□□□□□ -2.19
HOXC5Q00444 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 AL136313.1-201ENST00000624804 202 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 AC017037.3-201ENST00000625016 472 ntBASIC1.35□□□□□ -2.19
HOXC5Q00444 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HOXC5Q00444 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.19
HOXC5Q00444 RNU4-13P-201ENST00000364019 141 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 RNU6-898P-201ENST00000365627 104 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HOXC5Q00444 MIR1284-201ENST00000408337 120 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.34□□□□□ -2.19
HOXC5Q00444 AL353621.1-201ENST00000418219 243 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 AL592045.1-201ENST00000429867 352 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.34□□□□□ -2.19
HOXC5Q00444 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.34□□□□□ -2.19
HOXC5Q00444 RPL7P34-201ENST00000433316 712 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 RSU1P2-202ENST00000437884 485 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 AP000542.1-201ENST00000448473 371 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.34□□□□□ -2.19
HOXC5Q00444 HSPE1P24-201ENST00000450782 238 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.34□□□□□ -2.19
HOXC5Q00444 AC104629.1-201ENST00000494226 508 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 AC093752.1-206ENST00000511823 336 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 SNORA48.11-201ENST00000517015 89 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.34□□□□□ -2.19
HOXC5Q00444 AP004607.1-201ENST00000524456 203 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.34□□□□□ -2.19
HOXC5Q00444 AL136520.1-202ENST00000555494 763 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms