Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.14□□□□□ -2.23
CCL20P78556 RNU6-955P-201ENST00000410497 104 ntBASIC1.14□□□□□ -2.23
CCL20P78556 AL358453.1-201ENST00000422522 250 ntBASIC1.14□□□□□ -2.23
CCL20P78556 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.14□□□□□ -2.23
CCL20P78556 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.14□□□□□ -2.23
CCL20P78556 AL592045.1-201ENST00000429867 352 ntBASIC1.14□□□□□ -2.23
CCL20P78556 MTCO2P20-201ENST00000437339 673 ntBASIC1.14□□□□□ -2.23
CCL20P78556 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.14□□□□□ -2.23
CCL20P78556 HMGB1P18-201ENST00000438801 619 ntBASIC1.14□□□□□ -2.23
CCL20P78556 AC005094.1-201ENST00000440420 368 ntBASIC1.14□□□□□ -2.23
CCL20P78556 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.14□□□□□ -2.23
CCL20P78556 HMGN2P23-201ENST00000456759 269 ntBASIC1.14□□□□□ -2.23
CCL20P78556 AMD1P1-201ENST00000457220 922 ntBASIC1.14□□□□□ -2.23
CCL20P78556 AL672167.3-201ENST00000465951 960 ntBASIC1.14□□□□□ -2.23
CCL20P78556 RPL7P43-201ENST00000478876 753 ntBASIC1.14□□□□□ -2.23
CCL20P78556 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.14□□□□□ -2.23
CCL20P78556 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.14□□□□□ -2.23
CCL20P78556 FAM206BP-201ENST00000510179 541 ntBASIC1.14□□□□□ -2.23
CCL20P78556 RNU6-572P-201ENST00000516724 80 ntBASIC1.14□□□□□ -2.23
CCL20P78556 AP000763.2-201ENST00000540641 163 ntBASIC1.14□□□□□ -2.23
CCL20P78556 AC136619.2-201ENST00000563361 631 ntBASIC1.14□□□□□ -2.23
CCL20P78556 AC093249.1-201ENST00000567049 203 ntBASIC1.14□□□□□ -2.23
CCL20P78556 MIR4255-201ENST00000579351 72 ntBASIC1.14□□□□□ -2.23
CCL20P78556 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.14□□□□□ -2.23
CCL20P78556 AP002802.2-201ENST00000605877 235 ntBASIC1.14□□□□□ -2.23
CCL20P78556 BX248123.2-201ENST00000606318 124 ntBASIC1.14□□□□□ -2.23
CCL20P78556 MIR502-201ENST00000606349 86 ntBASIC1.14□□□□□ -2.23
CCL20P78556 MIR92B-201ENST00000607575 96 ntBASIC1.14□□□□□ -2.23
CCL20P78556 AC096772.1-201ENST00000609146 564 ntBASIC1.14□□□□□ -2.23
CCL20P78556 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.14□□□□□ -2.23
CCL20P78556 AC087241.4-201ENST00000612441 480 ntBASIC1.14□□□□□ -2.23
CCL20P78556 AC090970.3-201ENST00000612566 866 ntBASIC1.14□□□□□ -2.23
CCL20P78556 AC099842.1-201ENST00000619919 596 ntBASIC1.14□□□□□ -2.23
CCL20P78556 AP003485.1-201ENST00000625093 753 ntBASIC1.14□□□□□ -2.23
CCL20P78556 PCMTD1P7-201ENST00000634506 357 ntBASIC1.14□□□□□ -2.23
CCL20P78556 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.14□□□□□ -2.23
CCL20P78556 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.14□□□□□ -2.23
CCL20P78556 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.13□□□□□ -2.23
CCL20P78556 TEX21P-201ENST00000447107 1476 ntBASIC1.13□□□□□ -2.23
CCL20P78556 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
CCL20P78556 WWP1P1-201ENST00000466609 2769 ntBASIC1.13□□□□□ -2.23
CCL20P78556 MIR424-201ENST00000362227 98 ntBASIC1.13□□□□□ -2.23
CCL20P78556 SNORD114-19-201ENST00000363072 75 ntBASIC1.13□□□□□ -2.23
CCL20P78556 RNU6-288P-201ENST00000363690 104 ntBASIC1.13□□□□□ -2.23
CCL20P78556 RNU6-338P-201ENST00000383888 105 ntBASIC1.13□□□□□ -2.23
CCL20P78556 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CCL20P78556 MIR1323-201ENST00000408090 73 ntBASIC1.13□□□□□ -2.23
CCL20P78556 MIR1262-201ENST00000408276 93 ntBASIC1.13□□□□□ -2.23
CCL20P78556 RNA5SP501-201ENST00000410990 112 ntBASIC1.13□□□□□ -2.23
CCL20P78556 AC009310.1-201ENST00000414414 451 ntBASIC1.13□□□□□ -2.23
CCL20P78556 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.13□□□□□ -2.23
CCL20P78556 AC008267.5-201ENST00000424928 265 ntBASIC1.13□□□□□ -2.23
CCL20P78556 AL139415.2-201ENST00000431968 163 ntBASIC1.13□□□□□ -2.23
CCL20P78556 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.13□□□□□ -2.23
CCL20P78556 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.13□□□□□ -2.23
CCL20P78556 BTBD7P2-201ENST00000441962 620 ntBASIC1.13□□□□□ -2.23
CCL20P78556 FAM103A2P-201ENST00000444122 354 ntBASIC1.13□□□□□ -2.23
CCL20P78556 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CCL20P78556 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.13□□□□□ -2.23
CCL20P78556 PAXBP1P1-201ENST00000449315 447 ntBASIC1.13□□□□□ -2.23
CCL20P78556 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.13□□□□□ -2.23
CCL20P78556 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.13□□□□□ -2.23
CCL20P78556 RNU7-59P-201ENST00000459101 61 ntBASIC1.13□□□□□ -2.23
CCL20P78556 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.13□□□□□ -2.23
CCL20P78556 MTCO3P27-201ENST00000514397 196 ntBASIC1.13□□□□□ -2.23
CCL20P78556 RNU6-250P-201ENST00000516958 103 ntBASIC1.13□□□□□ -2.23
CCL20P78556 SNORA44.1-201ENST00000517031 108 ntBASIC1.13□□□□□ -2.23
CCL20P78556 AC009902.1-201ENST00000519351 183 ntBASIC1.13□□□□□ -2.23
CCL20P78556 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.13□□□□□ -2.23
CCL20P78556 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.13□□□□□ -2.23
CCL20P78556 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.13□□□□□ -2.23
CCL20P78556 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.13□□□□□ -2.23
CCL20P78556 IMMP1LP2-201ENST00000552954 492 ntBASIC1.13□□□□□ -2.23
CCL20P78556 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.13□□□□□ -2.23
CCL20P78556 AC073410.2-201ENST00000603240 332 ntBASIC1.13□□□□□ -2.23
CCL20P78556 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.13□□□□□ -2.23
CCL20P78556 AL512506.1-201ENST00000613918 449 ntBASIC1.13□□□□□ -2.23
CCL20P78556 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.13□□□□□ -2.23
CCL20P78556 U1.36-201ENST00000620684 176 ntBASIC1.13□□□□□ -2.23
CCL20P78556 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.12□□□□□ -2.23
CCL20P78556 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.12□□□□□ -2.23
CCL20P78556 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CCL20P78556 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
CCL20P78556 RNU6-777P-201ENST00000364265 104 ntBASIC1.12□□□□□ -2.23
CCL20P78556 SNORD14D-201ENST00000384390 87 ntBASIC1.12□□□□□ -2.23
CCL20P78556 MIR19A-201ENST00000384878 82 ntBASIC1.12□□□□□ -2.23
CCL20P78556 MIR518D-201ENST00000385014 87 ntBASIC1.12□□□□□ -2.23
CCL20P78556 MIR30A-201ENST00000385092 71 ntBASIC1.12□□□□□ -2.23
CCL20P78556 RNU2-48P-201ENST00000410694 191 ntBASIC1.12□□□□□ -2.23
CCL20P78556 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.12□□□□□ -2.23
CCL20P78556 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.12□□□□□ -2.23
CCL20P78556 AC006946.1-201ENST00000429106 328 ntBASIC1.12□□□□□ -2.23
CCL20P78556 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.12□□□□□ -2.23
CCL20P78556 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.12□□□□□ -2.23
CCL20P78556 AC245102.2-201ENST00000448956 180 ntBASIC1.12□□□□□ -2.23
CCL20P78556 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.12□□□□□ -2.23
CCL20P78556 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.12□□□□□ -2.23
CCL20P78556 PRELID3BP1-201ENST00000457142 540 ntBASIC1.12□□□□□ -2.23
CCL20P78556 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.12□□□□□ -2.23
CCL20P78556 AC109927.2-201ENST00000506416 303 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms