Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNU6-439P-201ENST00000384188 106 ntBASIC-0.23□□□□□ -2.45
RPL39P62891 MIR216A-201ENST00000385063 110 ntBASIC-0.23□□□□□ -2.45
RPL39P62891 RPS3AP1-201ENST00000413190 320 ntBASIC-0.23□□□□□ -2.45
RPL39P62891 AC139712.2-201ENST00000424302 339 ntBASIC-0.23□□□□□ -2.45
RPL39P62891 PTGES3P4-201ENST00000426243 356 ntBASIC-0.23□□□□□ -2.45
RPL39P62891 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.23□□□□□ -2.45
RPL39P62891 UBE2V2P4-201ENST00000447495 259 ntBASIC-0.23□□□□□ -2.45
RPL39P62891 SNRPGP9-201ENST00000456025 225 ntBASIC-0.23□□□□□ -2.45
RPL39P62891 MTND4LP3-201ENST00000468320 276 ntBASIC-0.23□□□□□ -2.45
RPL39P62891 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.23□□□□□ -2.45
RPL39P62891 AC108157.1-201ENST00000510511 539 ntBASIC-0.23□□□□□ -2.45
RPL39P62891 AC025465.3-201ENST00000510570 311 ntBASIC-0.23□□□□□ -2.45
RPL39P62891 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.23□□□□□ -2.45
RPL39P62891 RN7SKP12-201ENST00000516275 143 ntBASIC-0.23□□□□□ -2.45
RPL39P62891 IGJP1-201ENST00000522682 475 ntBASIC-0.23□□□□□ -2.45
RPL39P62891 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC-0.23□□□□□ -2.45
RPL39P62891 AC002400.1-201ENST00000569310 726 ntBASIC-0.23□□□□□ -2.45
RPL39P62891 U1.36-201ENST00000620684 176 ntBASIC-0.23□□□□□ -2.45
RPL39P62891 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
RPL39P62891 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
RPL39P62891 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC-0.23□□□□□ -2.45
RPL39P62891 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.24□□□□□ -2.45
RPL39P62891 RNU4-45P-201ENST00000365469 141 ntBASIC-0.24□□□□□ -2.45
RPL39P62891 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.24□□□□□ -2.45
RPL39P62891 AL590556.1-201ENST00000423231 483 ntBASIC-0.24□□□□□ -2.45
RPL39P62891 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
RPL39P62891 AL049874.1-201ENST00000489560 388 ntBASIC-0.24□□□□□ -2.45
RPL39P62891 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.24□□□□□ -2.45
RPL39P62891 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC-0.24□□□□□ -2.45
RPL39P62891 AC087481.2-201ENST00000565492 330 ntBASIC-0.24□□□□□ -2.45
RPL39P62891 AC090330.1-201ENST00000588646 764 ntBASIC-0.24□□□□□ -2.45
RPL39P62891 AP001330.4-201ENST00000604350 154 ntBASIC-0.24□□□□□ -2.45
RPL39P62891 AC022709.1-201ENST00000615967 87 ntBASIC-0.24□□□□□ -2.45
RPL39P62891 AL158163.2-201ENST00000619110 700 ntBASIC-0.24□□□□□ -2.45
RPL39P62891 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC-0.24□□□□□ -2.45
RPL39P62891 MIRLET7D-201ENST00000362263 87 ntBASIC-0.25□□□□□ -2.45
RPL39P62891 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC-0.25□□□□□ -2.45
RPL39P62891 AC092423.1-201ENST00000430165 186 ntBASIC-0.25□□□□□ -2.45
RPL39P62891 RPL31P35-201ENST00000431058 377 ntBASIC-0.25□□□□□ -2.45
RPL39P62891 AC009238.1-201ENST00000442165 424 ntBASIC-0.25□□□□□ -2.45
RPL39P62891 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.25□□□□□ -2.45
RPL39P62891 Z77249.1-201ENST00000444622 1175 ntBASIC-0.25□□□□□ -2.45
RPL39P62891 AC009237.6-201ENST00000446969 424 ntBASIC-0.25□□□□□ -2.45
RPL39P62891 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.25□□□□□ -2.45
RPL39P62891 MTND2P26-201ENST00000528255 1029 ntBASIC-0.25□□□□□ -2.45
RPL39P62891 AC092451.2-201ENST00000538746 658 ntBASIC-0.25□□□□□ -2.45
RPL39P62891 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC-0.25□□□□□ -2.45
RPL39P62891 AC107954.1-201ENST00000565906 727 ntBASIC-0.25□□□□□ -2.45
RPL39P62891 MIR5190-201ENST00000581537 80 ntBASIC-0.25□□□□□ -2.45
RPL39P62891 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.25□□□□□ -2.45
RPL39P62891 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC-0.25□□□□□ -2.45
RPL39P62891 AC010487.4-201ENST00000637027 61 ntBASIC-0.25□□□□□ -2.45
RPL39P62891 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC-0.26□□□□□ -2.45
RPL39P62891 RNU6-222P-201ENST00000362438 107 ntBASIC-0.26□□□□□ -2.45
RPL39P62891 RNA5SP391-201ENST00000363456 119 ntBASIC-0.26□□□□□ -2.45
RPL39P62891 SNORD89-201ENST00000390981 114 ntBASIC-0.26□□□□□ -2.45
RPL39P62891 AC099677.1-201ENST00000420575 175 ntBASIC-0.26□□□□□ -2.45
RPL39P62891 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC-0.26□□□□□ -2.45
RPL39P62891 RPL7P43-201ENST00000478876 753 ntBASIC-0.26□□□□□ -2.45
RPL39P62891 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.26□□□□□ -2.45
RPL39P62891 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.26□□□□□ -2.45
RPL39P62891 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.26□□□□□ -2.45
RPL39P62891 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.26□□□□□ -2.45
RPL39P62891 MIR4431-201ENST00000579990 94 ntBASIC-0.26□□□□□ -2.45
RPL39P62891 AC022432.1-201ENST00000595739 310 ntBASIC-0.26□□□□□ -2.45
RPL39P62891 AC105129.3-201ENST00000605455 485 ntBASIC-0.26□□□□□ -2.45
RPL39P62891 AC069294.1-201ENST00000608397 350 ntBASIC-0.26□□□□□ -2.45
RPL39P62891 AC007742.2-201ENST00000618226 398 ntBASIC-0.26□□□□□ -2.45
RPL39P62891 MTND4P31-201ENST00000425607 1343 ntBASIC-0.27□□□□□ -2.45
RPL39P62891 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
RPL39P62891 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.27□□□□□ -2.45
RPL39P62891 AC104651.1-201ENST00000427559 735 ntBASIC-0.27□□□□□ -2.45
RPL39P62891 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.27□□□□□ -2.45
RPL39P62891 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC-0.27□□□□□ -2.45
RPL39P62891 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC-0.27□□□□□ -2.45
RPL39P62891 AC022493.2-201ENST00000506122 481 ntBASIC-0.27□□□□□ -2.45
RPL39P62891 SNORA68.3-201ENST00000515906 83 ntBASIC-0.27□□□□□ -2.45
RPL39P62891 SNORA31.22-201ENST00000517204 135 ntBASIC-0.27□□□□□ -2.45
RPL39P62891 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC-0.27□□□□□ -2.45
RPL39P62891 SNRPGP16-201ENST00000533275 226 ntBASIC-0.27□□□□□ -2.45
RPL39P62891 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC-0.27□□□□□ -2.45
RPL39P62891 AC008121.1-201ENST00000603244 268 ntBASIC-0.27□□□□□ -2.45
RPL39P62891 MIR98-201ENST00000606724 119 ntBASIC-0.27□□□□□ -2.45
RPL39P62891 AC008443.7-201ENST00000622195 246 ntBASIC-0.27□□□□□ -2.45
RPL39P62891 MIR371B-201ENST00000638082 66 ntBASIC-0.27□□□□□ -2.45
RPL39P62891 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC-0.28□□□□□ -2.45
RPL39P62891 SNORD33-201ENST00000362761 85 ntBASIC-0.28□□□□□ -2.45
RPL39P62891 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.28□□□□□ -2.45
RPL39P62891 MIR218-1-201ENST00000384999 110 ntBASIC-0.28□□□□□ -2.45
RPL39P62891 DSTNP4-201ENST00000399472 474 ntBASIC-0.28□□□□□ -2.45
RPL39P62891 MIR1283-2-201ENST00000408621 87 ntBASIC-0.28□□□□□ -2.45
RPL39P62891 EZH2P1-201ENST00000431167 291 ntBASIC-0.28□□□□□ -2.45
RPL39P62891 ZNF965P-201ENST00000432501 817 ntBASIC-0.28□□□□□ -2.45
RPL39P62891 AC067940.1-201ENST00000458411 300 ntBASIC-0.28□□□□□ -2.45
RPL39P62891 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.28□□□□□ -2.45
RPL39P62891 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC-0.28□□□□□ -2.45
RPL39P62891 AC084373.1-201ENST00000603311 235 ntBASIC-0.28□□□□□ -2.45
RPL39P62891 AL139344.1-201ENST00000605228 195 ntBASIC-0.28□□□□□ -2.45
RPL39P62891 AL031775.1-201ENST00000607014 887 ntBASIC-0.28□□□□□ -2.45
RPL39P62891 AC100812.1-201ENST00000607622 580 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms