Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MIR634-201ENST00000385208 97 ntBASIC2.78□□□□□ -1.96
CDH11P55287 RNA5SP38-201ENST00000410750 119 ntBASIC2.78□□□□□ -1.96
CDH11P55287 RNU4-46P-201ENST00000410818 138 ntBASIC2.78□□□□□ -1.96
CDH11P55287 RNU6-193P-201ENST00000410977 107 ntBASIC2.78□□□□□ -1.96
CDH11P55287 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH11P55287 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH11P55287 ZNF863P-201ENST00000426746 417 ntBASIC2.78□□□□□ -1.96
CDH11P55287 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.78□□□□□ -1.96
CDH11P55287 AL669831.1-202ENST00000428504 417 ntBASIC2.78□□□□□ -1.96
CDH11P55287 RPL21P40-201ENST00000428586 483 ntBASIC2.78□□□□□ -1.96
CDH11P55287 MTND1P2-201ENST00000430604 821 ntBASIC2.78□□□□□ -1.96
CDH11P55287 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH11P55287 MYL8P-204ENST00000431574 518 ntBASIC2.78□□□□□ -1.96
CDH11P55287 SNRPEP9-201ENST00000436794 238 ntBASIC2.78□□□□□ -1.96
CDH11P55287 GTF2IP13-201ENST00000438487 386 ntBASIC2.78□□□□□ -1.96
CDH11P55287 RPL21P2-201ENST00000440049 481 ntBASIC2.78□□□□□ -1.96
CDH11P55287 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.78□□□□□ -1.96
CDH11P55287 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.78□□□□□ -1.96
CDH11P55287 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.78□□□□□ -1.96
CDH11P55287 AC069439.1-201ENST00000494739 167 ntBASIC2.78□□□□□ -1.96
CDH11P55287 EIF4EP3-201ENST00000498782 656 ntBASIC2.78□□□□□ -1.96
CDH11P55287 RNU6-928P-201ENST00000516876 104 ntBASIC2.78□□□□□ -1.96
CDH11P55287 RNA5SP165-201ENST00000517142 115 ntBASIC2.78□□□□□ -1.96
CDH11P55287 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH11P55287 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH11P55287 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH11P55287 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.78□□□□□ -1.96
CDH11P55287 AC106782.4-201ENST00000568264 210 ntBASIC2.78□□□□□ -1.96
CDH11P55287 MIR1273C-201ENST00000578669 77 ntBASIC2.78□□□□□ -1.96
CDH11P55287 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH11P55287 MIR3609-201ENST00000582661 80 ntBASIC2.78□□□□□ -1.96
CDH11P55287 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH11P55287 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CDH11P55287 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.78□□□□□ -1.96
CDH11P55287 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CDH11P55287 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
CDH11P55287 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDH11P55287 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.77□□□□□ -1.97
CDH11P55287 AC010680.1-201ENST00000590024 3590 ntBASIC2.77□□□□□ -1.97
CDH11P55287 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDH11P55287 ASNSP3-201ENST00000451989 1306 ntBASIC2.77□□□□□ -1.97
CDH11P55287 MIR422A-201ENST00000362286 90 ntBASIC2.77□□□□□ -1.97
CDH11P55287 Y_RNA.295-201ENST00000364918 102 ntBASIC2.77□□□□□ -1.97
CDH11P55287 RNU4-20P-201ENST00000365601 151 ntBASIC2.77□□□□□ -1.97
CDH11P55287 RNU6-116P-201ENST00000384042 109 ntBASIC2.77□□□□□ -1.97
CDH11P55287 RNU6-38P-201ENST00000384085 107 ntBASIC2.77□□□□□ -1.97
CDH11P55287 RNU6-1127P-201ENST00000384580 107 ntBASIC2.77□□□□□ -1.97
CDH11P55287 MIR514A2-201ENST00000385131 88 ntBASIC2.77□□□□□ -1.97
CDH11P55287 MIR514A3-201ENST00000385132 88 ntBASIC2.77□□□□□ -1.97
CDH11P55287 AL138885.1-201ENST00000405921 675 ntBASIC2.77□□□□□ -1.97
CDH11P55287 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH11P55287 SNRPEP10-201ENST00000420249 274 ntBASIC2.77□□□□□ -1.97
CDH11P55287 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.77□□□□□ -1.97
CDH11P55287 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH11P55287 AC104332.2-201ENST00000429959 156 ntBASIC2.77□□□□□ -1.97
CDH11P55287 MRPS10P2-201ENST00000431226 381 ntBASIC2.77□□□□□ -1.97
CDH11P55287 AL360271.2-201ENST00000447710 161 ntBASIC2.77□□□□□ -1.97
CDH11P55287 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.77□□□□□ -1.97
CDH11P55287 RPL12P25-201ENST00000455592 494 ntBASIC2.77□□□□□ -1.97
CDH11P55287 RNU6-333P-201ENST00000459117 107 ntBASIC2.77□□□□□ -1.97
CDH11P55287 RPL21P41-201ENST00000459863 264 ntBASIC2.77□□□□□ -1.97
CDH11P55287 RN7SL20P-201ENST00000488827 297 ntBASIC2.77□□□□□ -1.97
CDH11P55287 AC022493.1-201ENST00000492984 337 ntBASIC2.77□□□□□ -1.97
CDH11P55287 AC139453.3-201ENST00000493276 369 ntBASIC2.77□□□□□ -1.97
CDH11P55287 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.77□□□□□ -1.97
CDH11P55287 CCDC34P1-201ENST00000507441 517 ntBASIC2.77□□□□□ -1.97
CDH11P55287 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.77□□□□□ -1.97
CDH11P55287 RNU6-703P-201ENST00000516946 107 ntBASIC2.77□□□□□ -1.97
CDH11P55287 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.77□□□□□ -1.97
CDH11P55287 PSMA2P1-201ENST00000526365 646 ntBASIC2.77□□□□□ -1.97
CDH11P55287 AL137161.1-201ENST00000532231 390 ntBASIC2.77□□□□□ -1.97
CDH11P55287 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.77□□□□□ -1.97
CDH11P55287 AL157871.3-201ENST00000557231 293 ntBASIC2.77□□□□□ -1.97
CDH11P55287 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH11P55287 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.77□□□□□ -1.97
CDH11P55287 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH11P55287 MIR5583-1-201ENST00000580941 59 ntBASIC2.77□□□□□ -1.97
CDH11P55287 AC011471.1-201ENST00000585766 187 ntBASIC2.77□□□□□ -1.97
CDH11P55287 AL035413.2-201ENST00000604801 525 ntBASIC2.77□□□□□ -1.97
CDH11P55287 AC007938.3-201ENST00000604965 623 ntBASIC2.77□□□□□ -1.97
CDH11P55287 AL670379.4-201ENST00000605279 254 ntBASIC2.77□□□□□ -1.97
CDH11P55287 AC024614.3-201ENST00000637860 256 ntBASIC2.77□□□□□ -1.97
CDH11P55287 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDH11P55287 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CDH11P55287 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH11P55287 AC009487.2-201ENST00000420969 6821 ntBASIC2.76□□□□□ -1.97
CDH11P55287 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CDH11P55287 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDH11P55287 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CDH11P55287 RNU6-778P-201ENST00000363269 103 ntBASIC2.76□□□□□ -1.97
CDH11P55287 MIR578-201ENST00000384828 96 ntBASIC2.76□□□□□ -1.97
CDH11P55287 RNU6-1077P-201ENST00000410506 102 ntBASIC2.76□□□□□ -1.97
CDH11P55287 OR9R1P-201ENST00000412200 877 ntBASIC2.76□□□□□ -1.97
CDH11P55287 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH11P55287 USP9YP6-201ENST00000413550 854 ntBASIC2.76□□□□□ -1.97
CDH11P55287 HSPE1P1-201ENST00000421494 318 ntBASIC2.76□□□□□ -1.97
CDH11P55287 SKA2P1-201ENST00000425592 390 ntBASIC2.76□□□□□ -1.97
CDH11P55287 SRIP2-201ENST00000428470 166 ntBASIC2.76□□□□□ -1.97
CDH11P55287 AC010099.1-201ENST00000455434 375 ntBASIC2.76□□□□□ -1.97
CDH11P55287 AL590639.1-201ENST00000456484 337 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms