Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF144AP50876 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RNF144AP50876 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF144AP50876 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF144AP50876 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RNF144AP50876 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF144AP50876 RNU6-1298P-201ENST00000362456 101 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 RNU6-199P-201ENST00000362954 107 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 RNU1-140P-201ENST00000365040 165 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 RNU6-629P-201ENST00000384061 103 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 SNORA70.10-201ENST00000384515 134 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 Y_RNA.542-201ENST00000384641 111 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RNF144AP50876 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.7□□□□□ -1.66
RNF144AP50876 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF144AP50876 SNRPEP9-201ENST00000436794 238 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF144AP50876 COPS8P2-201ENST00000473228 627 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 AC107027.2-201ENST00000512197 115 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 CYCSP23-201ENST00000519781 313 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF144AP50876 LINC00933-203ENST00000559812 219 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 CYCSP39-201ENST00000565821 309 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 ZNF192P1-203ENST00000565888 810 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF144AP50876 AP002826.1-201ENST00000608835 315 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 RPSAP73-201ENST00000614820 330 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 LINC00901.1-201ENST00000617252 152 ntBASIC4.7□□□□□ -1.66
RNF144AP50876 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
RNF144AP50876 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RNF144AP50876 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF144AP50876 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF144AP50876 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RNF144AP50876 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF144AP50876 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF144AP50876 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF144AP50876 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RNF144AP50876 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF144AP50876 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF144AP50876 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF144AP50876 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF144AP50876 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF144AP50876 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF144AP50876 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF144AP50876 SNORA63.4-201ENST00000362763 126 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 RNU5F-3P-201ENST00000363767 117 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 RNU6-899P-201ENST00000363947 107 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 RNA5SP455-201ENST00000365190 119 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 SNORA2.3-201ENST00000383920 135 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 RNU6-376P-201ENST00000384731 106 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 MIR1286-201ENST00000408112 78 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 MIR1182-201ENST00000408363 97 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF144AP50876 DDX39BP1-205ENST00000422507 192 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 OR2AH1P-201ENST00000425717 928 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 AL590383.1-201ENST00000428602 75 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 AC009238.2-201ENST00000431026 355 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF144AP50876 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF144AP50876 Y_RNA.637-201ENST00000459424 114 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 RNA5SP103-201ENST00000459503 118 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 RN7SL172P-201ENST00000460535 303 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 RN7SL443P-201ENST00000464331 290 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 RN7SL214P-201ENST00000487317 265 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 RNU4-57P-201ENST00000515980 135 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 SNORA31.20-201ENST00000517111 133 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF144AP50876 HSPE1P4-201ENST00000550617 308 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 AC009127.3-201ENST00000570531 403 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.69□□□□□ -1.66
RNF144AP50876 AC136624.4-201ENST00000573044 370 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 MIR5571-201ENST00000577998 113 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 MIR4458-201ENST00000578872 75 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 TUG1_4.1-201ENST00000619464 181 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 AC091932.3-201ENST00000624223 323 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF144AP50876 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF144AP50876 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF144AP50876 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF144AP50876 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF144AP50876 MTND5P35-201ENST00000557537 1720 ntBASIC4.69□□□□□ -1.66
RNF144AP50876 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF144AP50876 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF144AP50876 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF144AP50876 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF144AP50876 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF144AP50876 AC008568.2-201ENST00000623862 2313 ntBASIC4.68□□□□□ -1.66
RNF144AP50876 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF144AP50876 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF144AP50876 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF144AP50876 SNORD56.1-201ENST00000362913 68 ntBASIC4.68□□□□□ -1.66
RNF144AP50876 Y_RNA.420-201ENST00000384043 110 ntBASIC4.68□□□□□ -1.66
RNF144AP50876 RNU6-578P-201ENST00000390980 103 ntBASIC4.68□□□□□ -1.66
RNF144AP50876 RNU6-381P-201ENST00000391259 108 ntBASIC4.68□□□□□ -1.66
RNF144AP50876 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF144AP50876 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF144AP50876 RPL34P20-201ENST00000442771 351 ntBASIC4.68□□□□□ -1.66
RNF144AP50876 AURKAPS2-201ENST00000454983 333 ntBASIC4.68□□□□□ -1.66
RNF144AP50876 BX284632.1-201ENST00000478218 541 ntBASIC4.68□□□□□ -1.66
RNF144AP50876 RPS21P4-201ENST00000487122 248 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms