Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 TUG1_2.1-201ENST00000614234 87 ntBASIC3.62□□□□□ -1.83
CLK3P49761 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.62□□□□□ -1.83
CLK3P49761 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLK3P49761 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLK3P49761 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CLK3P49761 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLK3P49761 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.61□□□□□ -1.83
CLK3P49761 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLK3P49761 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CLK3P49761 SNORD62.1-201ENST00000362541 86 ntBASIC3.61□□□□□ -1.83
CLK3P49761 Y_RNA.152-201ENST00000363578 100 ntBASIC3.61□□□□□ -1.83
CLK3P49761 RNA5SP399-201ENST00000364003 117 ntBASIC3.61□□□□□ -1.83
CLK3P49761 SMIM11P1-201ENST00000369586 178 ntBASIC3.61□□□□□ -1.83
CLK3P49761 RNU6-95P-201ENST00000384697 107 ntBASIC3.61□□□□□ -1.83
CLK3P49761 RNU6-823P-201ENST00000391042 103 ntBASIC3.61□□□□□ -1.83
CLK3P49761 MIR548I3-201ENST00000408378 149 ntBASIC3.61□□□□□ -1.83
CLK3P49761 MIR548I1-201ENST00000408810 149 ntBASIC3.61□□□□□ -1.83
CLK3P49761 RNU2-71P-201ENST00000411395 189 ntBASIC3.61□□□□□ -1.83
CLK3P49761 AL356968.1-201ENST00000416622 474 ntBASIC3.61□□□□□ -1.83
CLK3P49761 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.61□□□□□ -1.83
CLK3P49761 AC004975.1-201ENST00000428733 208 ntBASIC3.61□□□□□ -1.83
CLK3P49761 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.61□□□□□ -1.83
CLK3P49761 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.61□□□□□ -1.83
CLK3P49761 MTCO3P45-201ENST00000443036 613 ntBASIC3.61□□□□□ -1.83
CLK3P49761 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.61□□□□□ -1.83
CLK3P49761 AC108860.1-201ENST00000484521 383 ntBASIC3.61□□□□□ -1.83
CLK3P49761 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.61□□□□□ -1.83
CLK3P49761 TRBV12-2-201ENST00000489763 344 ntBASIC3.61□□□□□ -1.83
CLK3P49761 SNORA31.8-201ENST00000516327 108 ntBASIC3.61□□□□□ -1.83
CLK3P49761 RN7SKP83-201ENST00000516512 178 ntBASIC3.61□□□□□ -1.83
CLK3P49761 RNA5SP164-201ENST00000516533 110 ntBASIC3.61□□□□□ -1.83
CLK3P49761 CYCSP27-201ENST00000527643 293 ntBASIC3.61□□□□□ -1.83
CLK3P49761 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.61□□□□□ -1.83
CLK3P49761 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.61□□□□□ -1.83
CLK3P49761 AC005899.2-201ENST00000584353 90 ntBASIC3.61□□□□□ -1.83
CLK3P49761 AC011494.1-201ENST00000596454 237 ntBASIC3.61□□□□□ -1.83
CLK3P49761 AL365434.2-201ENST00000607979 234 ntBASIC3.61□□□□□ -1.83
CLK3P49761 MIR6810-201ENST00000622701 70 ntBASIC3.61□□□□□ -1.83
CLK3P49761 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.61□□□□□ -1.83
CLK3P49761 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CLK3P49761 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.61□□□□□ -1.83
CLK3P49761 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
CLK3P49761 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLK3P49761 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CLK3P49761 AL353746.1-201ENST00000566293 6881 ntBASIC3.61□□□□□ -1.83
CLK3P49761 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLK3P49761 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CLK3P49761 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
CLK3P49761 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CLK3P49761 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLK3P49761 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CLK3P49761 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
CLK3P49761 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CLK3P49761 RNU6-874P-201ENST00000362390 105 ntBASIC3.6□□□□□ -1.83
CLK3P49761 SNORA23-201ENST00000365128 182 ntBASIC3.6□□□□□ -1.83
CLK3P49761 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CLK3P49761 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CLK3P49761 Y_RNA.552-201ENST00000384665 112 ntBASIC3.6□□□□□ -1.83
CLK3P49761 HSPE1P26-201ENST00000405341 275 ntBASIC3.6□□□□□ -1.83
CLK3P49761 PPIAP31-201ENST00000405422 495 ntBASIC3.6□□□□□ -1.83
CLK3P49761 RNU2-23P-201ENST00000410545 195 ntBASIC3.6□□□□□ -1.83
CLK3P49761 RNU6-293P-201ENST00000411259 106 ntBASIC3.6□□□□□ -1.83
CLK3P49761 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.6□□□□□ -1.83
CLK3P49761 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.6□□□□□ -1.83
CLK3P49761 AC099799.1-201ENST00000439809 192 ntBASIC3.6□□□□□ -1.83
CLK3P49761 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.6□□□□□ -1.83
CLK3P49761 RPL26P6-201ENST00000440913 438 ntBASIC3.6□□□□□ -1.83
CLK3P49761 PCNPP5-201ENST00000452246 481 ntBASIC3.6□□□□□ -1.83
CLK3P49761 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.6□□□□□ -1.83
CLK3P49761 AC117503.1-201ENST00000472241 394 ntBASIC3.6□□□□□ -1.83
CLK3P49761 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.6□□□□□ -1.83
CLK3P49761 RNU6-408P-201ENST00000515910 100 ntBASIC3.6□□□□□ -1.83
CLK3P49761 SCARNA16.2-201ENST00000516520 172 ntBASIC3.6□□□□□ -1.83
CLK3P49761 SNORA31.22-201ENST00000517204 135 ntBASIC3.6□□□□□ -1.83
CLK3P49761 RNU6-323P-201ENST00000521915 107 ntBASIC3.6□□□□□ -1.83
CLK3P49761 AC022616.4-201ENST00000522985 181 ntBASIC3.6□□□□□ -1.83
CLK3P49761 ERHP1-201ENST00000523006 310 ntBASIC3.6□□□□□ -1.83
CLK3P49761 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.6□□□□□ -1.83
CLK3P49761 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.6□□□□□ -1.83
CLK3P49761 AC026371.1-201ENST00000551867 419 ntBASIC3.6□□□□□ -1.83
CLK3P49761 MED28P6-201ENST00000558776 231 ntBASIC3.6□□□□□ -1.83
CLK3P49761 RPL23AP84-201ENST00000571193 464 ntBASIC3.6□□□□□ -1.83
CLK3P49761 MIR3690-201ENST00000580266 75 ntBASIC3.6□□□□□ -1.83
CLK3P49761 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.6□□□□□ -1.83
CLK3P49761 AL021879.1-201ENST00000611756 288 ntBASIC3.6□□□□□ -1.83
CLK3P49761 AL589994.2-201ENST00000621124 579 ntBASIC3.6□□□□□ -1.83
CLK3P49761 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLK3P49761 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.6□□□□□ -1.83
CLK3P49761 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.6□□□□□ -1.83
CLK3P49761 AC091812.1-201ENST00000432235 1948 ntBASIC3.6□□□□□ -1.83
CLK3P49761 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CLK3P49761 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLK3P49761 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CLK3P49761 AL133383.2-201ENST00000622958 2336 ntBASIC3.59□□□□□ -1.83
CLK3P49761 RNU6-266P-201ENST00000364225 107 ntBASIC3.59□□□□□ -1.83
CLK3P49761 RNU6-450P-201ENST00000364654 107 ntBASIC3.59□□□□□ -1.83
CLK3P49761 RNU6-715P-201ENST00000365204 103 ntBASIC3.59□□□□□ -1.83
CLK3P49761 SNORA41-201ENST00000384675 132 ntBASIC3.59□□□□□ -1.83
CLK3P49761 MIR184-201ENST00000384962 84 ntBASIC3.59□□□□□ -1.83
CLK3P49761 RNU4-61P-201ENST00000411243 107 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms