Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AC005296.1-201ENST00000616145 209 ntBASIC5.98□□□□□ -1.45
PRIM1P49642 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PRIM1P49642 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.98□□□□□ -1.45
PRIM1P49642 OR4G2P-202ENST00000641004 1759 ntBASIC5.98□□□□□ -1.45
PRIM1P49642 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PRIM1P49642 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.98□□□□□ -1.45
PRIM1P49642 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PRIM1P49642 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.98□□□□□ -1.45
PRIM1P49642 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PRIM1P49642 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
PRIM1P49642 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
PRIM1P49642 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PRIM1P49642 RNU6-78P-201ENST00000362897 107 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 Y_RNA.121-201ENST00000363309 113 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 RNU5F-3P-201ENST00000363767 117 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 Y_RNA.217-201ENST00000364214 105 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 Y_RNA.331-201ENST00000365267 102 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 RNU6-142P-201ENST00000384019 107 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 RNU6-20P-201ENST00000384106 107 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 Y_RNA.446-201ENST00000384178 104 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 RNA5SP171-201ENST00000391071 115 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 RNU5E-9P-201ENST00000411164 104 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 RPL36AP10-201ENST00000421785 322 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 AC007560.1-201ENST00000426912 237 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 WARS2P1-201ENST00000429678 537 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 AC011998.1-201ENST00000433403 117 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 Y_RNA.641-201ENST00000459414 105 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 RNY3P16-201ENST00000516338 101 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 RNU6-567P-201ENST00000516746 107 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 RNA5SP290-201ENST00000517133 127 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 HMGB1P14-201ENST00000557424 591 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 TGIF1P1-201ENST00000558095 802 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.97□□□□□ -1.45
PRIM1P49642 AL356157.2-201ENST00000605122 111 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 SNX18P1Y-201ENST00000616231 511 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 AC133552.1-201ENST00000569988 4007 ntBASIC5.97□□□□□ -1.45
PRIM1P49642 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PRIM1P49642 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PRIM1P49642 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PRIM1P49642 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PRIM1P49642 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.97□□□□□ -1.45
PRIM1P49642 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
PRIM1P49642 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PRIM1P49642 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.96□□□□□ -1.45
PRIM1P49642 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PRIM1P49642 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PRIM1P49642 RNU6-166P-201ENST00000384371 107 ntBASIC5.96□□□□□ -1.46
PRIM1P49642 SNORD20-201ENST00000384550 80 ntBASIC5.96□□□□□ -1.46
PRIM1P49642 AC024067.1-201ENST00000426199 223 ntBASIC5.96□□□□□ -1.46
PRIM1P49642 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.96□□□□□ -1.46
PRIM1P49642 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.96□□□□□ -1.46
PRIM1P49642 AC010409.1-201ENST00000487382 476 ntBASIC5.96□□□□□ -1.46
PRIM1P49642 RPL23AP49-201ENST00000492925 468 ntBASIC5.96□□□□□ -1.46
PRIM1P49642 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.96□□□□□ -1.46
PRIM1P49642 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.96□□□□□ -1.46
PRIM1P49642 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.96□□□□□ -1.46
PRIM1P49642 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.96□□□□□ -1.46
PRIM1P49642 AC034229.5-201ENST00000624258 185 ntBASIC5.96□□□□□ -1.46
PRIM1P49642 MIR492-201ENST00000638676 116 ntBASIC5.96□□□□□ -1.46
PRIM1P49642 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.96□□□□□ -1.46
PRIM1P49642 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PRIM1P49642 AL445487.1-201ENST00000415694 1580 ntBASIC5.96□□□□□ -1.46
PRIM1P49642 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.96□□□□□ -1.46
PRIM1P49642 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PRIM1P49642 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.96□□□□□ -1.46
PRIM1P49642 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
PRIM1P49642 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.95□□□□□ -1.46
PRIM1P49642 Y_RNA.7-201ENST00000362352 102 ntBASIC5.95□□□□□ -1.46
PRIM1P49642 RNU6-105P-201ENST00000363909 104 ntBASIC5.95□□□□□ -1.46
PRIM1P49642 RNU1-132P-201ENST00000364300 164 ntBASIC5.95□□□□□ -1.46
PRIM1P49642 RNU6-1248P-201ENST00000391096 64 ntBASIC5.95□□□□□ -1.46
PRIM1P49642 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.95□□□□□ -1.46
PRIM1P49642 ANP32BP2-201ENST00000454525 545 ntBASIC5.95□□□□□ -1.46
PRIM1P49642 AC092798.1-201ENST00000458542 409 ntBASIC5.95□□□□□ -1.46
PRIM1P49642 AL591473.1-201ENST00000464297 313 ntBASIC5.95□□□□□ -1.46
PRIM1P49642 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.95□□□□□ -1.46
PRIM1P49642 PARP4P3-201ENST00000510265 317 ntBASIC5.95□□□□□ -1.46
PRIM1P49642 RNU5F-8P-201ENST00000515941 111 ntBASIC5.95□□□□□ -1.46
PRIM1P49642 RNU6-919P-201ENST00000516731 104 ntBASIC5.95□□□□□ -1.46
PRIM1P49642 RPL21P9-201ENST00000556149 474 ntBASIC5.95□□□□□ -1.46
PRIM1P49642 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.95□□□□□ -1.46
PRIM1P49642 AC068831.7-201ENST00000616954 363 ntBASIC5.95□□□□□ -1.46
PRIM1P49642 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PRIM1P49642 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
PRIM1P49642 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
PRIM1P49642 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PRIM1P49642 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
PRIM1P49642 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.95□□□□□ -1.46
PRIM1P49642 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PRIM1P49642 AC125257.1-201ENST00000560400 2930 ntBASIC5.95□□□□□ -1.46
PRIM1P49642 AC022893.2-201ENST00000564832 3296 ntBASIC5.94□□□□□ -1.46
PRIM1P49642 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PRIM1P49642 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.94□□□□□ -1.46
PRIM1P49642 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PRIM1P49642 RNU6-1245P-201ENST00000411130 106 ntBASIC5.94□□□□□ -1.46
PRIM1P49642 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PRIM1P49642 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.94□□□□□ -1.46
PRIM1P49642 GEMIN8P3-201ENST00000445417 720 ntBASIC5.94□□□□□ -1.46
PRIM1P49642 AC005042.3-201ENST00000453230 174 ntBASIC5.94□□□□□ -1.46
PRIM1P49642 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms