Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RNU6-1329P-201ENST00000365664 107 ntBASIC3.13□□□□□ -1.91
SOX2P48431 AP002088.1-201ENST00000382740 395 ntBASIC3.13□□□□□ -1.91
SOX2P48431 RNU6-166P-201ENST00000384371 107 ntBASIC3.13□□□□□ -1.91
SOX2P48431 SNORD116-29-201ENST00000384516 83 ntBASIC3.13□□□□□ -1.91
SOX2P48431 MIR30B-201ENST00000384850 88 ntBASIC3.13□□□□□ -1.91
SOX2P48431 MIR10A-201ENST00000385043 110 ntBASIC3.13□□□□□ -1.91
SOX2P48431 MIR34A-201ENST00000385130 110 ntBASIC3.13□□□□□ -1.91
SOX2P48431 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SOX2P48431 AL591034.1-201ENST00000407447 340 ntBASIC3.13□□□□□ -1.91
SOX2P48431 Y_RNA.625-201ENST00000411256 107 ntBASIC3.13□□□□□ -1.91
SOX2P48431 RNU6-293P-201ENST00000411259 106 ntBASIC3.13□□□□□ -1.91
SOX2P48431 RN7SKP53-201ENST00000411337 315 ntBASIC3.13□□□□□ -1.91
SOX2P48431 RNU6-954P-201ENST00000411355 107 ntBASIC3.13□□□□□ -1.91
SOX2P48431 ATG3P1-201ENST00000419507 911 ntBASIC3.13□□□□□ -1.91
SOX2P48431 AF228730.4-201ENST00000421457 183 ntBASIC3.13□□□□□ -1.91
SOX2P48431 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.13□□□□□ -1.91
SOX2P48431 AL117339.2-201ENST00000430475 180 ntBASIC3.13□□□□□ -1.91
SOX2P48431 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.13□□□□□ -1.91
SOX2P48431 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.13□□□□□ -1.91
SOX2P48431 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.13□□□□□ -1.91
SOX2P48431 RPS3AP46-201ENST00000448352 682 ntBASIC3.13□□□□□ -1.91
SOX2P48431 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.13□□□□□ -1.91
SOX2P48431 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.13□□□□□ -1.91
SOX2P48431 RPL12P25-201ENST00000455592 494 ntBASIC3.13□□□□□ -1.91
SOX2P48431 AC092798.1-201ENST00000458542 409 ntBASIC3.13□□□□□ -1.91
SOX2P48431 RNA5SP310-201ENST00000459084 116 ntBASIC3.13□□□□□ -1.91
SOX2P48431 AC116337.1-201ENST00000509680 687 ntBASIC3.13□□□□□ -1.91
SOX2P48431 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.13□□□□□ -1.91
SOX2P48431 RNU6-1016P-201ENST00000516689 94 ntBASIC3.13□□□□□ -1.91
SOX2P48431 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.13□□□□□ -1.91
SOX2P48431 AC011602.1-201ENST00000546484 331 ntBASIC3.13□□□□□ -1.91
SOX2P48431 AL442663.2-201ENST00000554385 511 ntBASIC3.13□□□□□ -1.91
SOX2P48431 MIR3186-201ENST00000577404 85 ntBASIC3.13□□□□□ -1.91
SOX2P48431 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.13□□□□□ -1.91
SOX2P48431 AL355598.1-201ENST00000604169 202 ntBASIC3.13□□□□□ -1.91
SOX2P48431 ELOCP5-201ENST00000604924 333 ntBASIC3.13□□□□□ -1.91
SOX2P48431 AL627309.6-201ENST00000606857 840 ntBASIC3.13□□□□□ -1.91
SOX2P48431 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.13□□□□□ -1.91
SOX2P48431 MIR6716-201ENST00000613413 80 ntBASIC3.13□□□□□ -1.91
SOX2P48431 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.13□□□□□ -1.91
SOX2P48431 AC022149.2-201ENST00000621061 203 ntBASIC3.13□□□□□ -1.91
SOX2P48431 U6.99-201ENST00000637524 83 ntBASIC3.13□□□□□ -1.91
SOX2P48431 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SOX2P48431 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.13□□□□□ -1.91
SOX2P48431 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SOX2P48431 ZNF807-201ENST00000328088 1707 ntBASIC3.13□□□□□ -1.91
SOX2P48431 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SOX2P48431 MTND4P23-201ENST00000447723 1363 ntBASIC3.12□□□□□ -1.91
SOX2P48431 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.12□□□□□ -1.91
SOX2P48431 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SOX2P48431 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SOX2P48431 SNORD62.1-201ENST00000362541 86 ntBASIC3.12□□□□□ -1.91
SOX2P48431 Y_RNA.394-201ENST00000383942 103 ntBASIC3.12□□□□□ -1.91
SOX2P48431 RNU6-1227P-201ENST00000383981 107 ntBASIC3.12□□□□□ -1.91
SOX2P48431 SNORA70C-201ENST00000384538 135 ntBASIC3.12□□□□□ -1.91
SOX2P48431 SNORD73A-201ENST00000386062 65 ntBASIC3.12□□□□□ -1.91
SOX2P48431 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SOX2P48431 Y_RNA.579-201ENST00000390939 94 ntBASIC3.12□□□□□ -1.91
SOX2P48431 RNU6-55P-201ENST00000411092 107 ntBASIC3.12□□□□□ -1.91
SOX2P48431 RNU6-1304P-201ENST00000411374 106 ntBASIC3.12□□□□□ -1.91
SOX2P48431 AC245054.2-201ENST00000415639 319 ntBASIC3.12□□□□□ -1.91
SOX2P48431 PGBD4P6-201ENST00000421501 610 ntBASIC3.12□□□□□ -1.91
SOX2P48431 AL139247.1-201ENST00000422768 325 ntBASIC3.12□□□□□ -1.91
SOX2P48431 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SOX2P48431 AL591419.1-201ENST00000427423 339 ntBASIC3.12□□□□□ -1.91
SOX2P48431 AC005534.2-201ENST00000431047 433 ntBASIC3.12□□□□□ -1.91
SOX2P48431 AL645568.3-201ENST00000433683 316 ntBASIC3.12□□□□□ -1.91
SOX2P48431 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SOX2P48431 RPS4XP22-201ENST00000480755 780 ntBASIC3.12□□□□□ -1.91
SOX2P48431 HMGN1P11-201ENST00000508668 303 ntBASIC3.12□□□□□ -1.91
SOX2P48431 AC110768.1-201ENST00000509222 400 ntBASIC3.12□□□□□ -1.91
SOX2P48431 RNU6-1231P-201ENST00000517185 103 ntBASIC3.12□□□□□ -1.91
SOX2P48431 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.12□□□□□ -1.91
SOX2P48431 AP006245.1-201ENST00000522549 120 ntBASIC3.12□□□□□ -1.91
SOX2P48431 AC104576.1-201ENST00000524225 88 ntBASIC3.12□□□□□ -1.91
SOX2P48431 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SOX2P48431 CYCSP30-201ENST00000546447 172 ntBASIC3.12□□□□□ -1.91
SOX2P48431 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.12□□□□□ -1.91
SOX2P48431 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.12□□□□□ -1.91
SOX2P48431 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.12□□□□□ -1.91
SOX2P48431 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.12□□□□□ -1.91
SOX2P48431 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.12□□□□□ -1.91
SOX2P48431 AC064836.2-201ENST00000609491 462 ntBASIC3.12□□□□□ -1.91
SOX2P48431 AC099778.2-201ENST00000610904 211 ntBASIC3.12□□□□□ -1.91
SOX2P48431 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.12□□□□□ -1.91
SOX2P48431 AC090971.5-201ENST00000621102 293 ntBASIC3.12□□□□□ -1.91
SOX2P48431 AF117829.1-206ENST00000621883 3802 ntBASIC3.12□□□□□ -1.91
SOX2P48431 MIR6830-201ENST00000636015 70 ntBASIC3.12□□□□□ -1.91
SOX2P48431 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.12□□□□□ -1.91
SOX2P48431 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SOX2P48431 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SOX2P48431 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SOX2P48431 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SOX2P48431 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SOX2P48431 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SOX2P48431 SNORA63-201ENST00000363450 132 ntBASIC3.11□□□□□ -1.91
SOX2P48431 RNU6-1188P-201ENST00000363795 107 ntBASIC3.11□□□□□ -1.91
SOX2P48431 RNU6-43P-201ENST00000384302 107 ntBASIC3.11□□□□□ -1.91
SOX2P48431 RPL21P17-201ENST00000397467 475 ntBASIC3.11□□□□□ -1.91
SOX2P48431 AL445529.1-201ENST00000398713 389 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms