Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RNU6-512P-201ENST00000364438 103 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 U8.10-201ENST00000384260 133 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 AL627390.1-201ENST00000396055 340 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 MIR888-201ENST00000401186 77 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 NDUFS5P1-201ENST00000405668 289 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 RNU2-49P-201ENST00000410666 184 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.9□□□□□ -2.11
CXCL12P48061 EIF1AXP1-201ENST00000419267 435 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 RPS27AP14-201ENST00000422868 454 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 Z82205.1-201ENST00000428456 297 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.9□□□□□ -2.11
CXCL12P48061 HMGB1P27-201ENST00000431429 603 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 USP9YP8-201ENST00000441913 500 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 MTND5P2-201ENST00000442927 1142 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 RPS15AP27-201ENST00000449183 343 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.9□□□□□ -2.11
CXCL12P48061 MTAPP1-201ENST00000489154 819 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 AC005840.1-201ENST00000498412 377 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 TRMT112P2-201ENST00000512910 132 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 RN7SKP287-201ENST00000516546 266 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 RNU6-1003P-201ENST00000517099 105 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.9□□□□□ -2.11
CXCL12P48061 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.9□□□□□ -2.11
CXCL12P48061 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.9□□□□□ -2.11
CXCL12P48061 GLYCAM1-201ENST00000546596 285 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 MIR3146-201ENST00000580367 79 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.9□□□□□ -2.11
CXCL12P48061 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.9□□□□□ -2.11
CXCL12P48061 AP001981.2-201ENST00000603241 418 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 AL355877.2-201ENST00000603670 358 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 AL161798.1-201ENST00000604630 131 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 AC093424.1-201ENST00000604999 338 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 AL359821.1-201ENST00000605519 182 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 MIR6840-201ENST00000611937 71 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CXCL12P48061 AC090970.3-201ENST00000612566 866 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.9□□□□□ -2.11
CXCL12P48061 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.9□□□□□ -2.11
CXCL12P48061 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
CXCL12P48061 CR848007.1-201ENST00000442354 1699 ntBASIC1.9□□□□□ -2.11
CXCL12P48061 WWP1P1-201ENST00000466609 2769 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 RNU6-661P-201ENST00000362409 107 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 RNY4P24-201ENST00000362735 96 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 RNU6-1284P-201ENST00000363701 100 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 RNY3P13-201ENST00000365542 102 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CXCL12P48061 RNU6-701P-201ENST00000384059 107 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 RNU1-52P-201ENST00000384190 164 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 MIR499A-201ENST00000384903 122 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AL021407.1-201ENST00000404531 386 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 RNU4-62P-201ENST00000410125 130 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AF274854.1-201ENST00000413236 615 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AP1B1P2-201ENST00000416196 106 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.89□□□□□ -2.11
CXCL12P48061 SKA2P1-201ENST00000425592 390 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.89□□□□□ -2.11
CXCL12P48061 RPS15AP5-201ENST00000436276 388 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 MTCYBP39-201ENST00000437562 491 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.89□□□□□ -2.11
CXCL12P48061 PGBD4P3-201ENST00000440731 581 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.89□□□□□ -2.11
CXCL12P48061 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.89□□□□□ -2.11
CXCL12P48061 AC090096.1-201ENST00000489168 390 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 RPS27AP10-201ENST00000496103 208 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AC105252.1-201ENST00000503089 286 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 RNA5SP165-201ENST00000517142 115 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AC022634.1-201ENST00000520765 532 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.89□□□□□ -2.11
CXCL12P48061 AP006587.4-201ENST00000526053 529 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.89□□□□□ -2.11
CXCL12P48061 ZNF321P-202ENST00000550843 495 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AL359212.1-201ENST00000556608 614 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AC009094.1-201ENST00000564443 426 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 SUB1P3-201ENST00000564581 315 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AC012435.1-202ENST00000568772 240 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 MIR4658-201ENST00000584344 65 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AL353778.1-201ENST00000603149 408 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 MTCYBP22-201ENST00000603788 447 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AP000860.1-201ENST00000605250 559 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 AL137847.3-201ENST00000611521 109 ntBASIC1.89□□□□□ -2.11
CXCL12P48061 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
CXCL12P48061 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.89□□□□□ -2.11
CXCL12P48061 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.89□□□□□ -2.11
CXCL12P48061 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.88□□□□□ -2.11
CXCL12P48061 AL445523.1-201ENST00000451184 1362 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
CXCL12P48061 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CXCL12P48061 UBE2L2-201ENST00000254302 429 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.88□□□□□ -2.11
CXCL12P48061 RNU6-500P-201ENST00000362349 107 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 RNY4P16-201ENST00000364768 94 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 Y_RNA.508-201ENST00000384502 114 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 RNU6-1072P-201ENST00000384703 107 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 RNU6-443P-201ENST00000384780 107 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 SNORA67.5-201ENST00000391036 107 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.88□□□□□ -2.11
CXCL12P48061 RNU2-20P-201ENST00000410425 191 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 RPL17P12-201ENST00000413391 526 ntBASIC1.88□□□□□ -2.11
CXCL12P48061 ELOCP17-201ENST00000414751 326 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms