Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.18□□□□□ -2.06
SSR1P43307 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.18□□□□□ -2.06
SSR1P43307 AC027124.2-201ENST00000428249 105 ntBASIC2.18□□□□□ -2.06
SSR1P43307 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.18□□□□□ -2.06
SSR1P43307 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.18□□□□□ -2.06
SSR1P43307 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.18□□□□□ -2.06
SSR1P43307 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.18□□□□□ -2.06
SSR1P43307 RPL23AP41-201ENST00000484754 458 ntBASIC2.18□□□□□ -2.06
SSR1P43307 MTND1P3-201ENST00000484956 952 ntBASIC2.18□□□□□ -2.06
SSR1P43307 FAM92A1P2-202ENST00000504766 877 ntBASIC2.18□□□□□ -2.06
SSR1P43307 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.18□□□□□ -2.06
SSR1P43307 RNU6-572P-201ENST00000516724 80 ntBASIC2.18□□□□□ -2.06
SSR1P43307 SNORA31.23-201ENST00000517219 133 ntBASIC2.18□□□□□ -2.06
SSR1P43307 AC107934.1-201ENST00000522215 217 ntBASIC2.18□□□□□ -2.06
SSR1P43307 MTATP6P15-201ENST00000527233 835 ntBASIC2.18□□□□□ -2.06
SSR1P43307 AC009063.1-201ENST00000563342 702 ntBASIC2.18□□□□□ -2.06
SSR1P43307 AC105245.1-201ENST00000581934 244 ntBASIC2.18□□□□□ -2.06
SSR1P43307 MIR5002-201ENST00000584713 97 ntBASIC2.18□□□□□ -2.06
SSR1P43307 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.18□□□□□ -2.06
SSR1P43307 AC009314.1-201ENST00000603871 304 ntBASIC2.18□□□□□ -2.06
SSR1P43307 AC107952.2-201ENST00000606048 486 ntBASIC2.18□□□□□ -2.06
SSR1P43307 AC090970.3-201ENST00000612566 866 ntBASIC2.18□□□□□ -2.06
SSR1P43307 MIR6852-201ENST00000621699 66 ntBASIC2.18□□□□□ -2.06
SSR1P43307 AL512643.1-201ENST00000635735 524 ntBASIC2.18□□□□□ -2.06
SSR1P43307 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SSR1P43307 HSPA8P4-201ENST00000511877 1920 ntBASIC2.17□□□□□ -2.06
SSR1P43307 RNU6-234P-201ENST00000365229 104 ntBASIC2.17□□□□□ -2.06
SSR1P43307 XGY1-201ENST00000381172 446 ntBASIC2.17□□□□□ -2.06
SSR1P43307 RN7SKP32-201ENST00000410167 303 ntBASIC2.17□□□□□ -2.06
SSR1P43307 RNA5SP508-201ENST00000411327 119 ntBASIC2.17□□□□□ -2.06
SSR1P43307 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.17□□□□□ -2.06
SSR1P43307 RPS12P24-201ENST00000412619 387 ntBASIC2.17□□□□□ -2.06
SSR1P43307 ELOCP17-201ENST00000414751 326 ntBASIC2.17□□□□□ -2.06
SSR1P43307 BX276092.3-201ENST00000424182 230 ntBASIC2.17□□□□□ -2.06
SSR1P43307 SDR42E1P3-201ENST00000438345 502 ntBASIC2.17□□□□□ -2.06
SSR1P43307 AC108059.3-201ENST00000456388 214 ntBASIC2.17□□□□□ -2.06
SSR1P43307 snoU109.1-201ENST00000459339 135 ntBASIC2.17□□□□□ -2.06
SSR1P43307 AC080013.2-201ENST00000460866 323 ntBASIC2.17□□□□□ -2.06
SSR1P43307 AC112771.1-201ENST00000463581 102 ntBASIC2.17□□□□□ -2.06
SSR1P43307 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.17□□□□□ -2.06
SSR1P43307 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.17□□□□□ -2.06
SSR1P43307 AP005639.2-201ENST00000527592 928 ntBASIC2.17□□□□□ -2.06
SSR1P43307 OR5AL2P-201ENST00000532185 920 ntBASIC2.17□□□□□ -2.06
SSR1P43307 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.17□□□□□ -2.06
SSR1P43307 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.17□□□□□ -2.06
SSR1P43307 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.17□□□□□ -2.06
SSR1P43307 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.17□□□□□ -2.06
SSR1P43307 AC026464.5-201ENST00000562497 722 ntBASIC2.17□□□□□ -2.06
SSR1P43307 MIR3146-201ENST00000580367 79 ntBASIC2.17□□□□□ -2.06
SSR1P43307 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.17□□□□□ -2.06
SSR1P43307 AC022202.1-201ENST00000613515 211 ntBASIC2.17□□□□□ -2.06
SSR1P43307 AC006927.4-201ENST00000639187 543 ntBASIC2.17□□□□□ -2.06
SSR1P43307 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
SSR1P43307 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.17□□□□□ -2.06
SSR1P43307 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
SSR1P43307 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SSR1P43307 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SSR1P43307 AC096920.1-201ENST00000423991 241 ntBASIC2.16□□□□□ -2.06
SSR1P43307 PTGES3P4-201ENST00000426243 356 ntBASIC2.16□□□□□ -2.06
SSR1P43307 AL035407.1-201ENST00000429211 571 ntBASIC2.16□□□□□ -2.06
SSR1P43307 RPS15AP9-201ENST00000439856 381 ntBASIC2.16□□□□□ -2.06
SSR1P43307 USP9YP8-201ENST00000441913 500 ntBASIC2.16□□□□□ -2.06
SSR1P43307 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.16□□□□□ -2.06
SSR1P43307 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.16□□□□□ -2.06
SSR1P43307 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.16□□□□□ -2.06
SSR1P43307 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SSR1P43307 AC068587.4-201ENST00000533893 186 ntBASIC2.16□□□□□ -2.06
SSR1P43307 AC135279.1-201ENST00000543493 504 ntBASIC2.16□□□□□ -2.06
SSR1P43307 AC069294.1-201ENST00000608397 350 ntBASIC2.16□□□□□ -2.06
SSR1P43307 Y_RNA.783-201ENST00000613546 102 ntBASIC2.16□□□□□ -2.06
SSR1P43307 AL031667.3-201ENST00000620124 655 ntBASIC2.16□□□□□ -2.06
SSR1P43307 DUXAP9-208ENST00000622815 614 ntBASIC2.16□□□□□ -2.06
SSR1P43307 AP002791.1-201ENST00000623291 381 ntBASIC2.16□□□□□ -2.06
SSR1P43307 OR4G3P-201ENST00000633500 913 ntBASIC2.16□□□□□ -2.06
SSR1P43307 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SSR1P43307 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SSR1P43307 RNU1-72P-201ENST00000362976 153 ntBASIC2.15□□□□□ -2.07
SSR1P43307 SNORA67.3-201ENST00000384366 140 ntBASIC2.15□□□□□ -2.07
SSR1P43307 RNU6-253P-201ENST00000384730 105 ntBASIC2.15□□□□□ -2.07
SSR1P43307 RPL17P12-201ENST00000413391 526 ntBASIC2.15□□□□□ -2.07
SSR1P43307 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.15□□□□□ -2.07
SSR1P43307 RAC1P6-201ENST00000423911 575 ntBASIC2.15□□□□□ -2.07
SSR1P43307 UBE2D3P1-201ENST00000436669 444 ntBASIC2.15□□□□□ -2.07
SSR1P43307 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.15□□□□□ -2.07
SSR1P43307 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.15□□□□□ -2.07
SSR1P43307 RPL23AP6-201ENST00000446637 472 ntBASIC2.15□□□□□ -2.07
SSR1P43307 AC140059.1-201ENST00000489238 361 ntBASIC2.15□□□□□ -2.07
SSR1P43307 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.15□□□□□ -2.07
SSR1P43307 AF131216.2-201ENST00000512316 564 ntBASIC2.15□□□□□ -2.07
SSR1P43307 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.15□□□□□ -2.07
SSR1P43307 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.15□□□□□ -2.07
SSR1P43307 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.15□□□□□ -2.07
SSR1P43307 AC243960.4-201ENST00000600532 288 ntBASIC2.15□□□□□ -2.07
SSR1P43307 KC877982.1-201ENST00000602313 470 ntBASIC2.15□□□□□ -2.07
SSR1P43307 BNIP3P9-201ENST00000603714 553 ntBASIC2.15□□□□□ -2.07
SSR1P43307 AL355598.1-201ENST00000604169 202 ntBASIC2.15□□□□□ -2.07
SSR1P43307 AC018714.1-201ENST00000605028 208 ntBASIC2.15□□□□□ -2.07
SSR1P43307 AC068276.1-201ENST00000605793 379 ntBASIC2.15□□□□□ -2.07
SSR1P43307 AC144521.1-201ENST00000607148 956 ntBASIC2.15□□□□□ -2.07
SSR1P43307 AL136370.1-201ENST00000608166 691 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms