Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AL021997.2-201ENST00000615674 271 ntBASIC4.27□□□□□ -1.73
CCNFP41002 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.27□□□□□ -1.73
CCNFP41002 AC099506.2-201ENST00000623074 221 ntBASIC4.27□□□□□ -1.73
CCNFP41002 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCNFP41002 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNFP41002 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCNFP41002 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCNFP41002 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.27□□□□□ -1.73
CCNFP41002 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.27□□□□□ -1.73
CCNFP41002 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCNFP41002 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCNFP41002 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCNFP41002 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.26□□□□□ -1.73
CCNFP41002 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.26□□□□□ -1.73
CCNFP41002 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CCNFP41002 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.26□□□□□ -1.73
CCNFP41002 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.26□□□□□ -1.73
CCNFP41002 SNORA62-201ENST00000365493 153 ntBASIC4.26□□□□□ -1.73
CCNFP41002 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCNFP41002 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CCNFP41002 MT-TR-201ENST00000387439 65 ntBASIC4.26□□□□□ -1.73
CCNFP41002 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCNFP41002 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.26□□□□□ -1.73
CCNFP41002 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.26□□□□□ -1.73
CCNFP41002 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.26□□□□□ -1.73
CCNFP41002 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.26□□□□□ -1.73
CCNFP41002 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.26□□□□□ -1.73
CCNFP41002 RN7SL459P-201ENST00000481078 302 ntBASIC4.26□□□□□ -1.73
CCNFP41002 AC104564.1-201ENST00000493028 407 ntBASIC4.26□□□□□ -1.73
CCNFP41002 NDUFB4P9-201ENST00000511646 388 ntBASIC4.26□□□□□ -1.73
CCNFP41002 RNU6-612P-201ENST00000516909 102 ntBASIC4.26□□□□□ -1.73
CCNFP41002 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.26□□□□□ -1.73
CCNFP41002 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.26□□□□□ -1.73
CCNFP41002 MIR7702-201ENST00000621931 59 ntBASIC4.26□□□□□ -1.73
CCNFP41002 AC090617.7-201ENST00000623952 126 ntBASIC4.26□□□□□ -1.73
CCNFP41002 AC140479.6-201ENST00000633535 357 ntBASIC4.26□□□□□ -1.73
CCNFP41002 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.26□□□□□ -1.73
CCNFP41002 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCNFP41002 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCNFP41002 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CCNFP41002 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCNFP41002 AL359693.1-201ENST00000614959 2407 ntBASIC4.25□□□□□ -1.73
CCNFP41002 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCNFP41002 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.25□□□□□ -1.73
CCNFP41002 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CCNFP41002 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCNFP41002 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCNFP41002 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCNFP41002 RNA5SP175-201ENST00000364275 119 ntBASIC4.25□□□□□ -1.73
CCNFP41002 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.25□□□□□ -1.73
CCNFP41002 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.25□□□□□ -1.73
CCNFP41002 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.25□□□□□ -1.73
CCNFP41002 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.25□□□□□ -1.73
CCNFP41002 Z82210.1-201ENST00000440037 231 ntBASIC4.25□□□□□ -1.73
CCNFP41002 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.25□□□□□ -1.73
CCNFP41002 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.25□□□□□ -1.73
CCNFP41002 RPS4XP13-201ENST00000483219 789 ntBASIC4.25□□□□□ -1.73
CCNFP41002 RPL30P5-201ENST00000494923 336 ntBASIC4.25□□□□□ -1.73
CCNFP41002 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.25□□□□□ -1.73
CCNFP41002 SNORA40.15-201ENST00000516884 107 ntBASIC4.25□□□□□ -1.73
CCNFP41002 RNU6-388P-201ENST00000517012 105 ntBASIC4.25□□□□□ -1.73
CCNFP41002 RNU6-389P-201ENST00000517048 105 ntBASIC4.25□□□□□ -1.73
CCNFP41002 AC109479.2-201ENST00000517842 174 ntBASIC4.25□□□□□ -1.73
CCNFP41002 IGHV3-76-201ENST00000522465 295 ntBASIC4.25□□□□□ -1.73
CCNFP41002 TOMM20P2-201ENST00000540082 421 ntBASIC4.25□□□□□ -1.73
CCNFP41002 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCNFP41002 AL360157.1-201ENST00000565962 87 ntBASIC4.25□□□□□ -1.73
CCNFP41002 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CCNFP41002 RPS29P30-201ENST00000600975 111 ntBASIC4.25□□□□□ -1.73
CCNFP41002 SRGNP1-201ENST00000603392 451 ntBASIC4.25□□□□□ -1.73
CCNFP41002 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.25□□□□□ -1.73
CCNFP41002 MIR8062-201ENST00000621515 85 ntBASIC4.25□□□□□ -1.73
CCNFP41002 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.25□□□□□ -1.73
CCNFP41002 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCNFP41002 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.25□□□□□ -1.73
CCNFP41002 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCNFP41002 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCNFP41002 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCNFP41002 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCNFP41002 AC090740.1-201ENST00000623193 2262 ntBASIC4.25□□□□□ -1.73
CCNFP41002 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.25□□□□□ -1.73
CCNFP41002 AC032011.1-201ENST00000611703 1549 ntBASIC4.25□□□□□ -1.73
CCNFP41002 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.25□□□□□ -1.73
CCNFP41002 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCNFP41002 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CCNFP41002 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.24□□□□□ -1.73
CCNFP41002 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.24□□□□□ -1.73
CCNFP41002 RNU6-874P-201ENST00000362390 105 ntBASIC4.24□□□□□ -1.73
CCNFP41002 U3.6-201ENST00000363622 211 ntBASIC4.24□□□□□ -1.73
CCNFP41002 RNU6-379P-201ENST00000363813 104 ntBASIC4.24□□□□□ -1.73
CCNFP41002 Y_RNA.222-201ENST00000364264 102 ntBASIC4.24□□□□□ -1.73
CCNFP41002 SNORA37-201ENST00000384504 129 ntBASIC4.24□□□□□ -1.73
CCNFP41002 RNU6-140P-201ENST00000384566 108 ntBASIC4.24□□□□□ -1.73
CCNFP41002 Y_RNA.526-201ENST00000384572 110 ntBASIC4.24□□□□□ -1.73
CCNFP41002 SNORA69.1-201ENST00000390904 137 ntBASIC4.24□□□□□ -1.73
CCNFP41002 HSPE1P26-201ENST00000405341 275 ntBASIC4.24□□□□□ -1.73
CCNFP41002 RN7SKP58-201ENST00000411010 305 ntBASIC4.24□□□□□ -1.73
CCNFP41002 RPL17P36-201ENST00000420302 549 ntBASIC4.24□□□□□ -1.73
CCNFP41002 EIF4EP2-201ENST00000422816 654 ntBASIC4.24□□□□□ -1.73
CCNFP41002 C4BPAP2-201ENST00000428434 478 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms