Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.09□□□□□ -2.07
RORAP35398 AC009902.1-201ENST00000519351 183 ntBASIC2.09□□□□□ -2.07
RORAP35398 AC022616.6-201ENST00000520479 119 ntBASIC2.09□□□□□ -2.07
RORAP35398 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.09□□□□□ -2.07
RORAP35398 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.09□□□□□ -2.07
RORAP35398 ELOCP32-201ENST00000548625 324 ntBASIC2.09□□□□□ -2.07
RORAP35398 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.09□□□□□ -2.07
RORAP35398 AL133241.1-201ENST00000556832 487 ntBASIC2.09□□□□□ -2.07
RORAP35398 AC091489.2-201ENST00000566263 604 ntBASIC2.09□□□□□ -2.07
RORAP35398 MIR3118-1-201ENST00000581787 76 ntBASIC2.09□□□□□ -2.07
RORAP35398 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.09□□□□□ -2.07
RORAP35398 AC078899.2-201ENST00000595282 212 ntBASIC2.09□□□□□ -2.07
RORAP35398 AC234772.3-201ENST00000602277 528 ntBASIC2.09□□□□□ -2.07
RORAP35398 AL158827.2-201ENST00000602494 330 ntBASIC2.09□□□□□ -2.07
RORAP35398 AC091152.3-201ENST00000604227 325 ntBASIC2.09□□□□□ -2.07
RORAP35398 MIR6132-201ENST00000622083 109 ntBASIC2.09□□□□□ -2.07
RORAP35398 AL356266.1-201ENST00000623311 483 ntBASIC2.09□□□□□ -2.07
RORAP35398 AC091953.2-201ENST00000623979 160 ntBASIC2.09□□□□□ -2.07
RORAP35398 AC093591.3-201ENST00000634516 308 ntBASIC2.09□□□□□ -2.07
RORAP35398 AL691447.3-201ENST00000635020 330 ntBASIC2.09□□□□□ -2.07
RORAP35398 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.09□□□□□ -2.08
RORAP35398 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.09□□□□□ -2.08
RORAP35398 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
RORAP35398 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
RORAP35398 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.08□□□□□ -2.08
RORAP35398 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.08□□□□□ -2.08
RORAP35398 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
RORAP35398 NACAP2-201ENST00000318548 624 ntBASIC2.08□□□□□ -2.08
RORAP35398 SNORD114-1-201ENST00000362705 72 ntBASIC2.08□□□□□ -2.08
RORAP35398 CIR1P3-201ENST00000405137 479 ntBASIC2.08□□□□□ -2.08
RORAP35398 OR51A5P-201ENST00000415429 942 ntBASIC2.08□□□□□ -2.08
RORAP35398 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.08□□□□□ -2.08
RORAP35398 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.08□□□□□ -2.08
RORAP35398 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.08□□□□□ -2.08
RORAP35398 AC011233.1-201ENST00000422812 283 ntBASIC2.08□□□□□ -2.08
RORAP35398 RAC1P6-201ENST00000423911 575 ntBASIC2.08□□□□□ -2.08
RORAP35398 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.08□□□□□ -2.08
RORAP35398 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.08□□□□□ -2.08
RORAP35398 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.08□□□□□ -2.08
RORAP35398 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.08□□□□□ -2.08
RORAP35398 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.08□□□□□ -2.08
RORAP35398 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.08□□□□□ -2.08
RORAP35398 AC004383.1-201ENST00000438135 289 ntBASIC2.08□□□□□ -2.08
RORAP35398 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.08□□□□□ -2.08
RORAP35398 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.08□□□□□ -2.08
RORAP35398 AC068587.2-201ENST00000478386 781 ntBASIC2.08□□□□□ -2.08
RORAP35398 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.08□□□□□ -2.08
RORAP35398 SCARNA16.3-201ENST00000516595 184 ntBASIC2.08□□□□□ -2.08
RORAP35398 MIR514B-201ENST00000516774 80 ntBASIC2.08□□□□□ -2.08
RORAP35398 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.08□□□□□ -2.08
RORAP35398 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.08□□□□□ -2.08
RORAP35398 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.08□□□□□ -2.08
RORAP35398 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.08□□□□□ -2.08
RORAP35398 MIR3167-201ENST00000579623 85 ntBASIC2.08□□□□□ -2.08
RORAP35398 MIR4765-201ENST00000585007 77 ntBASIC2.08□□□□□ -2.08
RORAP35398 AC007229.1-201ENST00000590455 412 ntBASIC2.08□□□□□ -2.08
RORAP35398 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.08□□□□□ -2.08
RORAP35398 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.08□□□□□ -2.08
RORAP35398 AL670379.6-201ENST00000603753 252 ntBASIC2.08□□□□□ -2.08
RORAP35398 AL670379.11-201ENST00000604059 253 ntBASIC2.08□□□□□ -2.08
RORAP35398 AC008162.1-201ENST00000604718 254 ntBASIC2.08□□□□□ -2.08
RORAP35398 AL670379.1-201ENST00000604752 252 ntBASIC2.08□□□□□ -2.08
RORAP35398 AL670379.5-201ENST00000605253 252 ntBASIC2.08□□□□□ -2.08
RORAP35398 AL670379.12-201ENST00000605291 253 ntBASIC2.08□□□□□ -2.08
RORAP35398 AL670379.8-201ENST00000605353 252 ntBASIC2.08□□□□□ -2.08
RORAP35398 AL670379.7-201ENST00000605823 252 ntBASIC2.08□□□□□ -2.08
RORAP35398 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.08□□□□□ -2.08
RORAP35398 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.08□□□□□ -2.08
RORAP35398 ZNF720P1-201ENST00000562403 1939 ntBASIC2.08□□□□□ -2.08
RORAP35398 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.07□□□□□ -2.08
RORAP35398 RNU5F-6P-201ENST00000362979 116 ntBASIC2.07□□□□□ -2.08
RORAP35398 RNU6-288P-201ENST00000363690 104 ntBASIC2.07□□□□□ -2.08
RORAP35398 OR5H15-201ENST00000383696 930 ntBASIC2.07□□□□□ -2.08
RORAP35398 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
RORAP35398 MIR504-201ENST00000385065 83 ntBASIC2.07□□□□□ -2.08
RORAP35398 RNU6-817P-201ENST00000391083 104 ntBASIC2.07□□□□□ -2.08
RORAP35398 RN7SKP32-201ENST00000410167 303 ntBASIC2.07□□□□□ -2.08
RORAP35398 RNU2-40P-201ENST00000410833 196 ntBASIC2.07□□□□□ -2.08
RORAP35398 RNU2-62P-201ENST00000410868 191 ntBASIC2.07□□□□□ -2.08
RORAP35398 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.07□□□□□ -2.08
RORAP35398 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.07□□□□□ -2.08
RORAP35398 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.07□□□□□ -2.08
RORAP35398 XKRYP1-201ENST00000423438 492 ntBASIC2.07□□□□□ -2.08
RORAP35398 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.07□□□□□ -2.08
RORAP35398 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.07□□□□□ -2.08
RORAP35398 Z98742.2-201ENST00000431564 187 ntBASIC2.07□□□□□ -2.08
RORAP35398 XKRYP2-201ENST00000432915 492 ntBASIC2.07□□□□□ -2.08
RORAP35398 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.07□□□□□ -2.08
RORAP35398 AL161651.1-201ENST00000440882 223 ntBASIC2.07□□□□□ -2.08
RORAP35398 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RORAP35398 FDX1P2-201ENST00000450769 375 ntBASIC2.07□□□□□ -2.08
RORAP35398 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.07□□□□□ -2.08
RORAP35398 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.07□□□□□ -2.08
RORAP35398 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.07□□□□□ -2.08
RORAP35398 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.07□□□□□ -2.08
RORAP35398 HSPE1P18-201ENST00000517602 280 ntBASIC2.07□□□□□ -2.08
RORAP35398 AC084851.1-201ENST00000529105 249 ntBASIC2.07□□□□□ -2.08
RORAP35398 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
RORAP35398 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
RORAP35398 AL121821.2-201ENST00000556081 394 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms