Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AL451054.2-201ENST00000420896 202 ntBASIC1.01□□□□□ -2.25
SDC4P31431 AC007435.1-201ENST00000421086 415 ntBASIC1.01□□□□□ -2.25
SDC4P31431 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.01□□□□□ -2.25
SDC4P31431 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.01□□□□□ -2.25
SDC4P31431 AL691517.1-201ENST00000440833 1235 ntBASIC1.01□□□□□ -2.25
SDC4P31431 AL441985.1-201ENST00000457727 251 ntBASIC1.01□□□□□ -2.25
SDC4P31431 TOMM22P6-201ENST00000465035 409 ntBASIC1.01□□□□□ -2.25
SDC4P31431 AC006512.1-201ENST00000468816 291 ntBASIC1.01□□□□□ -2.25
SDC4P31431 RPL36AP48-201ENST00000485521 314 ntBASIC1.01□□□□□ -2.25
SDC4P31431 HMGN1P7-201ENST00000491722 313 ntBASIC1.01□□□□□ -2.25
SDC4P31431 SNORA48.9-201ENST00000516419 162 ntBASIC1.01□□□□□ -2.25
SDC4P31431 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.01□□□□□ -2.25
SDC4P31431 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.01□□□□□ -2.25
SDC4P31431 AC005832.3-201ENST00000537929 631 ntBASIC1.01□□□□□ -2.25
SDC4P31431 AC090502.2-201ENST00000549267 280 ntBASIC1.01□□□□□ -2.25
SDC4P31431 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.01□□□□□ -2.25
SDC4P31431 AC012414.2-201ENST00000559474 187 ntBASIC1.01□□□□□ -2.25
SDC4P31431 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.01□□□□□ -2.25
SDC4P31431 BNIP3P10-201ENST00000605360 577 ntBASIC1.01□□□□□ -2.25
SDC4P31431 AC021646.1-201ENST00000605469 484 ntBASIC1.01□□□□□ -2.25
SDC4P31431 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.01□□□□□ -2.25
SDC4P31431 AC107075.1-201ENST00000613695 314 ntBASIC1.01□□□□□ -2.25
SDC4P31431 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.01□□□□□ -2.25
SDC4P31431 RNY1P10-201ENST00000363268 113 ntBASIC1□□□□□ -2.25
SDC4P31431 RNU2-28P-201ENST00000410457 189 ntBASIC1□□□□□ -2.25
SDC4P31431 AC078974.1-201ENST00000411597 223 ntBASIC1□□□□□ -2.25
SDC4P31431 AC092634.6-201ENST00000418558 192 ntBASIC1□□□□□ -2.25
SDC4P31431 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1□□□□□ -2.25
SDC4P31431 Y_RNA.638-201ENST00000459374 113 ntBASIC1□□□□□ -2.25
SDC4P31431 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1□□□□□ -2.25
SDC4P31431 AP005660.1-201ENST00000522972 293 ntBASIC1□□□□□ -2.25
SDC4P31431 AC079598.5-201ENST00000547460 117 ntBASIC1□□□□□ -2.25
SDC4P31431 AC044913.1-201ENST00000557200 430 ntBASIC1□□□□□ -2.25
SDC4P31431 AL713866.2-201ENST00000603579 219 ntBASIC1□□□□□ -2.25
SDC4P31431 AC004805.2-201ENST00000605382 482 ntBASIC1□□□□□ -2.25
SDC4P31431 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
SDC4P31431 AL109620.1-201ENST00000618738 1197 ntBASIC1□□□□□ -2.25
SDC4P31431 AL596245.1-201ENST00000618994 362 ntBASIC1□□□□□ -2.25
SDC4P31431 AC079416.3-201ENST00000624479 549 ntBASIC1□□□□□ -2.25
SDC4P31431 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SDC4P31431 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1□□□□□ -2.25
SDC4P31431 TEX21P-201ENST00000447107 1476 ntBASIC0.99□□□□□ -2.25
SDC4P31431 RBBP8P1-201ENST00000449447 1844 ntBASIC0.99□□□□□ -2.25
SDC4P31431 SNORD51.1-201ENST00000365405 77 ntBASIC0.99□□□□□ -2.25
SDC4P31431 SNORA22-201ENST00000383907 134 ntBASIC0.99□□□□□ -2.25
SDC4P31431 SNORA22C-201ENST00000384614 134 ntBASIC0.99□□□□□ -2.25
SDC4P31431 RPL22P22-201ENST00000395439 379 ntBASIC0.99□□□□□ -2.25
SDC4P31431 RNU2-36P-201ENST00000410361 191 ntBASIC0.99□□□□□ -2.25
SDC4P31431 TPMTP3-201ENST00000411928 735 ntBASIC0.99□□□□□ -2.25
SDC4P31431 MTND4P24-201ENST00000424002 397 ntBASIC0.99□□□□□ -2.25
SDC4P31431 AL121578.1-201ENST00000428051 892 ntBASIC0.99□□□□□ -2.25
SDC4P31431 AL353706.1-201ENST00000436728 494 ntBASIC0.99□□□□□ -2.25
SDC4P31431 MTCO2P20-201ENST00000437339 673 ntBASIC0.99□□□□□ -2.25
SDC4P31431 AC002381.1-201ENST00000447049 280 ntBASIC0.99□□□□□ -2.25
SDC4P31431 Z73417.1-201ENST00000447373 778 ntBASIC0.99□□□□□ -2.25
SDC4P31431 AC245517.4-201ENST00000448601 281 ntBASIC0.99□□□□□ -2.25
SDC4P31431 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.99□□□□□ -2.25
SDC4P31431 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.99□□□□□ -2.25
SDC4P31431 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.99□□□□□ -2.25
SDC4P31431 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.99□□□□□ -2.25
SDC4P31431 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.99□□□□□ -2.25
SDC4P31431 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.99□□□□□ -2.25
SDC4P31431 AL355598.1-201ENST00000604169 202 ntBASIC0.99□□□□□ -2.25
SDC4P31431 AC011451.2-201ENST00000604303 598 ntBASIC0.99□□□□□ -2.25
SDC4P31431 AL158211.4-201ENST00000606988 584 ntBASIC0.99□□□□□ -2.25
SDC4P31431 U6.101-201ENST00000637707 76 ntBASIC0.99□□□□□ -2.25
SDC4P31431 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.99□□□□□ -2.25
SDC4P31431 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SDC4P31431 CBX3P1-201ENST00000325243 554 ntBASIC0.98□□□□□ -2.25
SDC4P31431 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.98□□□□□ -2.25
SDC4P31431 RNU6-657P-201ENST00000383904 107 ntBASIC0.98□□□□□ -2.25
SDC4P31431 AL591034.2-201ENST00000402839 359 ntBASIC0.98□□□□□ -2.25
SDC4P31431 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.98□□□□□ -2.25
SDC4P31431 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.98□□□□□ -2.25
SDC4P31431 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.98□□□□□ -2.25
SDC4P31431 TPTE2P1-204ENST00000435256 593 ntBASIC0.98□□□□□ -2.25
SDC4P31431 AL022238.1-201ENST00000442557 355 ntBASIC0.98□□□□□ -2.25
SDC4P31431 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.98□□□□□ -2.25
SDC4P31431 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.98□□□□□ -2.25
SDC4P31431 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.98□□□□□ -2.25
SDC4P31431 AC245102.2-201ENST00000448956 180 ntBASIC0.98□□□□□ -2.25
SDC4P31431 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.98□□□□□ -2.25
SDC4P31431 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.98□□□□□ -2.25
SDC4P31431 AC013828.1-201ENST00000481845 158 ntBASIC0.98□□□□□ -2.25
SDC4P31431 RPS23P4-201ENST00000487908 423 ntBASIC0.98□□□□□ -2.25
SDC4P31431 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.98□□□□□ -2.25
SDC4P31431 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.98□□□□□ -2.25
SDC4P31431 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.98□□□□□ -2.25
SDC4P31431 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.98□□□□□ -2.25
SDC4P31431 AC118282.2-201ENST00000508739 374 ntBASIC0.98□□□□□ -2.25
SDC4P31431 SNORA25.11-201ENST00000515935 105 ntBASIC0.98□□□□□ -2.25
SDC4P31431 RNA5SP290-201ENST00000517133 127 ntBASIC0.98□□□□□ -2.25
SDC4P31431 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.98□□□□□ -2.25
SDC4P31431 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.98□□□□□ -2.25
SDC4P31431 ELOCP5-201ENST00000604924 333 ntBASIC0.98□□□□□ -2.25
SDC4P31431 AC097468.3-201ENST00000607956 456 ntBASIC0.98□□□□□ -2.25
SDC4P31431 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SDC4P31431 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SDC4P31431 RNU6-1080P-201ENST00000383982 107 ntBASIC0.97□□□□□ -2.25
SDC4P31431 RPL37P10-201ENST00000412884 288 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms