Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 RNU1-86P-201ENST00000516108 154 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 RNU6-1281P-201ENST00000516223 105 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 RNU1-107P-201ENST00000516617 154 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 SCARNA11.3-201ENST00000517276 130 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.04□□□□□ -1.92
ABCD3P28288 AP004607.1-201ENST00000524456 203 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ABCD3P28288 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.04□□□□□ -1.92
ABCD3P28288 MTCO3P23-201ENST00000561363 289 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 AC080078.2-201ENST00000603766 501 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 AC091152.3-201ENST00000604227 325 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 AC073657.2-201ENST00000605661 303 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.04□□□□□ -1.92
ABCD3P28288 uc_338.1-201ENST00000612113 180 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 FAM35CP-201ENST00000554755 2470 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
ABCD3P28288 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ABCD3P28288 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
ABCD3P28288 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.03□□□□□ -1.92
ABCD3P28288 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ABCD3P28288 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
ABCD3P28288 RNU6-384P-201ENST00000364900 104 ntBASIC3.03□□□□□ -1.92
ABCD3P28288 RNU1-100P-201ENST00000365255 165 ntBASIC3.03□□□□□ -1.92
ABCD3P28288 RNU6-748P-201ENST00000384648 107 ntBASIC3.03□□□□□ -1.92
ABCD3P28288 PRPS1P1-201ENST00000445305 876 ntBASIC3.03□□□□□ -1.92
ABCD3P28288 snoU13.22-201ENST00000459428 104 ntBASIC3.03□□□□□ -1.92
ABCD3P28288 AC110794.1-201ENST00000505816 425 ntBASIC3.03□□□□□ -1.92
ABCD3P28288 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ABCD3P28288 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.03□□□□□ -1.92
ABCD3P28288 RNU4-29P-201ENST00000515943 174 ntBASIC3.03□□□□□ -1.92
ABCD3P28288 RNU2-69P-201ENST00000516061 100 ntBASIC3.03□□□□□ -1.92
ABCD3P28288 AC068657.1-201ENST00000520807 306 ntBASIC3.03□□□□□ -1.92
ABCD3P28288 BNIP3P6-201ENST00000549284 499 ntBASIC3.03□□□□□ -1.92
ABCD3P28288 AC005261.5-201ENST00000596280 355 ntBASIC3.03□□□□□ -1.92
ABCD3P28288 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.03□□□□□ -1.92
ABCD3P28288 Z82243.1-201ENST00000609432 473 ntBASIC3.03□□□□□ -1.92
ABCD3P28288 U2.17-201ENST00000611454 95 ntBASIC3.03□□□□□ -1.92
ABCD3P28288 AL157817.1-201ENST00000614264 790 ntBASIC3.03□□□□□ -1.92
ABCD3P28288 MIR1321-201ENST00000637766 79 ntBASIC3.03□□□□□ -1.92
ABCD3P28288 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
ABCD3P28288 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ABCD3P28288 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ABCD3P28288 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
ABCD3P28288 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 SNORD46.1-201ENST00000364139 104 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 RNU6-72P-201ENST00000384285 79 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 Y_RNA.505-201ENST00000384489 102 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 U3.19-201ENST00000390893 196 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 SNORA16.2-201ENST00000390991 127 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 CIR1P3-201ENST00000405137 479 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 RNU6-648P-201ENST00000410190 107 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 AC016831.2-201ENST00000417179 352 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 RPL7P37-201ENST00000425095 738 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.02□□□□□ -1.93
ABCD3P28288 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.02□□□□□ -1.93
ABCD3P28288 HIGD1AP2-201ENST00000446367 280 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.02□□□□□ -1.93
ABCD3P28288 AC091179.1-201ENST00000461606 579 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 GZMAP1-201ENST00000503054 631 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 AC091885.1-201ENST00000506658 268 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.02□□□□□ -1.93
ABCD3P28288 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.02□□□□□ -1.93
ABCD3P28288 RNA5SP401-201ENST00000515920 127 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 RNU6-581P-201ENST00000516214 105 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.02□□□□□ -1.93
ABCD3P28288 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.02□□□□□ -1.93
ABCD3P28288 GLYCAM1-201ENST00000546596 285 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 MIR4424-201ENST00000585257 86 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.02□□□□□ -1.93
ABCD3P28288 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ABCD3P28288 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.02□□□□□ -1.93
ABCD3P28288 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 AC010338.1-201ENST00000621823 717 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 AL031601.2-202ENST00000622650 282 ntBASIC3.02□□□□□ -1.93
ABCD3P28288 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.02□□□□□ -1.93
ABCD3P28288 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
ABCD3P28288 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ABCD3P28288 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
ABCD3P28288 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
ABCD3P28288 MTND5P1-201ENST00000445440 1375 ntBASIC3.01□□□□□ -1.93
ABCD3P28288 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.01□□□□□ -1.93
ABCD3P28288 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.01□□□□□ -1.93
ABCD3P28288 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.01□□□□□ -1.93
ABCD3P28288 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
ABCD3P28288 Y_RNA.402-201ENST00000383972 102 ntBASIC3.01□□□□□ -1.93
ABCD3P28288 RNU6-1083P-201ENST00000384022 107 ntBASIC3.01□□□□□ -1.93
ABCD3P28288 MIR147B-201ENST00000390185 80 ntBASIC3.01□□□□□ -1.93
ABCD3P28288 RNU6-780P-201ENST00000391030 104 ntBASIC3.01□□□□□ -1.93
ABCD3P28288 U3.26-201ENST00000391236 204 ntBASIC3.01□□□□□ -1.93
ABCD3P28288 SNORA11.1-201ENST00000408133 129 ntBASIC3.01□□□□□ -1.93
ABCD3P28288 RNU2-3P-201ENST00000410144 191 ntBASIC3.01□□□□□ -1.93
ABCD3P28288 RNA5SP120-201ENST00000410900 112 ntBASIC3.01□□□□□ -1.93
ABCD3P28288 AF274854.1-201ENST00000413236 615 ntBASIC3.01□□□□□ -1.93
ABCD3P28288 USP9YP27-201ENST00000418455 438 ntBASIC3.01□□□□□ -1.93
ABCD3P28288 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.01□□□□□ -1.93
ABCD3P28288 RPL23AP22-201ENST00000437556 453 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms