Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC025755.1-201ENST00000521306 278 ntBASIC3.84□□□□□ -1.79
XPAP23025 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
XPAP23025 AC087499.8-201ENST00000578406 226 ntBASIC3.84□□□□□ -1.79
XPAP23025 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.84□□□□□ -1.79
XPAP23025 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.84□□□□□ -1.79
XPAP23025 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.84□□□□□ -1.79
XPAP23025 MIR8058-201ENST00000615737 89 ntBASIC3.84□□□□□ -1.79
XPAP23025 RMST_4.1-201ENST00000616886 107 ntBASIC3.84□□□□□ -1.79
XPAP23025 AC002076.2-201ENST00000617362 122 ntBASIC3.84□□□□□ -1.79
XPAP23025 AC138627.2-201ENST00000624202 601 ntBASIC3.84□□□□□ -1.79
XPAP23025 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
XPAP23025 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.84□□□□□ -1.8
XPAP23025 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
XPAP23025 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.84□□□□□ -1.8
XPAP23025 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.84□□□□□ -1.8
XPAP23025 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
XPAP23025 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.83□□□□□ -1.8
XPAP23025 UBE3AP2-201ENST00000429033 2259 ntBASIC3.83□□□□□ -1.8
XPAP23025 AL021368.2-201ENST00000606125 5352 ntBASIC3.83□□□□□ -1.8
XPAP23025 AC008568.2-201ENST00000623862 2313 ntBASIC3.83□□□□□ -1.8
XPAP23025 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.83□□□□□ -1.8
XPAP23025 SNORD62.1-201ENST00000362541 86 ntBASIC3.83□□□□□ -1.8
XPAP23025 SNORA63C-201ENST00000364578 129 ntBASIC3.83□□□□□ -1.8
XPAP23025 SNORA33.2-201ENST00000365413 134 ntBASIC3.83□□□□□ -1.8
XPAP23025 AL359837.1-201ENST00000381357 287 ntBASIC3.83□□□□□ -1.8
XPAP23025 RNU6-741P-201ENST00000383889 107 ntBASIC3.83□□□□□ -1.8
XPAP23025 RNU6-890P-201ENST00000384121 107 ntBASIC3.83□□□□□ -1.8
XPAP23025 RNU6-738P-201ENST00000384531 106 ntBASIC3.83□□□□□ -1.8
XPAP23025 U3.42-201ENST00000408746 214 ntBASIC3.83□□□□□ -1.8
XPAP23025 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
XPAP23025 AL159169.1-201ENST00000421119 127 ntBASIC3.83□□□□□ -1.8
XPAP23025 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.83□□□□□ -1.8
XPAP23025 AC009237.8-201ENST00000445492 379 ntBASIC3.83□□□□□ -1.8
XPAP23025 AC097473.1-201ENST00000508142 408 ntBASIC3.83□□□□□ -1.8
XPAP23025 RNU6-120P-201ENST00000516077 103 ntBASIC3.83□□□□□ -1.8
XPAP23025 AC069113.1-201ENST00000517763 267 ntBASIC3.83□□□□□ -1.8
XPAP23025 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.83□□□□□ -1.8
XPAP23025 SNRPGP18-201ENST00000553000 214 ntBASIC3.83□□□□□ -1.8
XPAP23025 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.83□□□□□ -1.8
XPAP23025 AC016925.2-201ENST00000605108 242 ntBASIC3.83□□□□□ -1.8
XPAP23025 AL732372.2-225ENST00000642124 456 ntBASIC3.83□□□□□ -1.8
XPAP23025 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
XPAP23025 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
XPAP23025 MTND5P10-201ENST00000603719 1809 ntBASIC3.83□□□□□ -1.8
XPAP23025 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
XPAP23025 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
XPAP23025 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
XPAP23025 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
XPAP23025 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.82□□□□□ -1.8
XPAP23025 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
XPAP23025 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
XPAP23025 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
XPAP23025 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
XPAP23025 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
XPAP23025 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
XPAP23025 MIR200C-201ENST00000384980 68 ntBASIC3.82□□□□□ -1.8
XPAP23025 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
XPAP23025 PTMAP2-201ENST00000397627 327 ntBASIC3.82□□□□□ -1.8
XPAP23025 RNA5SP306-201ENST00000411087 107 ntBASIC3.82□□□□□ -1.8
XPAP23025 PGBD4P6-201ENST00000421501 610 ntBASIC3.82□□□□□ -1.8
XPAP23025 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.82□□□□□ -1.8
XPAP23025 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.82□□□□□ -1.8
XPAP23025 AL583843.1-201ENST00000456070 346 ntBASIC3.82□□□□□ -1.8
XPAP23025 SNORA84-201ENST00000459229 133 ntBASIC3.82□□□□□ -1.8
XPAP23025 AL049830.2-201ENST00000480072 201 ntBASIC3.82□□□□□ -1.8
XPAP23025 HMGB1P30-201ENST00000492455 606 ntBASIC3.82□□□□□ -1.8
XPAP23025 SMURF2P1-201ENST00000514992 481 ntBASIC3.82□□□□□ -1.8
XPAP23025 MIR2114-201ENST00000516645 80 ntBASIC3.82□□□□□ -1.8
XPAP23025 Y_RNA.708-201ENST00000516950 96 ntBASIC3.82□□□□□ -1.8
XPAP23025 RNA5SP165-201ENST00000517142 115 ntBASIC3.82□□□□□ -1.8
XPAP23025 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.82□□□□□ -1.8
XPAP23025 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.82□□□□□ -1.8
XPAP23025 TRAV28-201ENST00000557548 323 ntBASIC3.82□□□□□ -1.8
XPAP23025 OR1M4P-201ENST00000589199 287 ntBASIC3.82□□□□□ -1.8
XPAP23025 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.82□□□□□ -1.8
XPAP23025 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.82□□□□□ -1.8
XPAP23025 CR392039.5-201ENST00000623201 510 ntBASIC3.82□□□□□ -1.8
XPAP23025 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.82□□□□□ -1.8
XPAP23025 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
XPAP23025 CUL1P1-201ENST00000509510 2425 ntBASIC3.82□□□□□ -1.8
XPAP23025 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
XPAP23025 AC005183.1-201ENST00000603687 1979 ntBASIC3.82□□□□□ -1.8
XPAP23025 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
XPAP23025 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
XPAP23025 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
XPAP23025 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
XPAP23025 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
XPAP23025 Y_RNA.5-201ENST00000362334 102 ntBASIC3.81□□□□□ -1.8
XPAP23025 Y_RNA.202-201ENST00000364083 110 ntBASIC3.81□□□□□ -1.8
XPAP23025 RNU6-331P-201ENST00000384724 107 ntBASIC3.81□□□□□ -1.8
XPAP23025 SNORA48.7-201ENST00000391302 135 ntBASIC3.81□□□□□ -1.8
XPAP23025 AL445529.1-201ENST00000398713 389 ntBASIC3.81□□□□□ -1.8
XPAP23025 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.81□□□□□ -1.8
XPAP23025 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.81□□□□□ -1.8
XPAP23025 UBE2V1P4-201ENST00000425374 344 ntBASIC3.81□□□□□ -1.8
XPAP23025 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.81□□□□□ -1.8
XPAP23025 NOTCH2P1-201ENST00000443481 624 ntBASIC3.81□□□□□ -1.8
XPAP23025 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.81□□□□□ -1.8
XPAP23025 SNORD5.1-201ENST00000458800 75 ntBASIC3.81□□□□□ -1.8
XPAP23025 RNU7-170P-201ENST00000459303 61 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms