Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.36□□□□□ -2.19
CXCL3P19876 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL3P19876 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CXCL3P19876 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL3P19876 RPL39P36-201ENST00000490784 156 ntBASIC1.36□□□□□ -2.19
CXCL3P19876 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL3P19876 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CXCL3P19876 AC084851.1-201ENST00000529105 249 ntBASIC1.36□□□□□ -2.19
CXCL3P19876 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.36□□□□□ -2.19
CXCL3P19876 AC136619.2-201ENST00000563361 631 ntBASIC1.36□□□□□ -2.19
CXCL3P19876 MIR3198-2-201ENST00000577868 80 ntBASIC1.36□□□□□ -2.19
CXCL3P19876 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
CXCL3P19876 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.36□□□□□ -2.19
CXCL3P19876 RPL21P136-201ENST00000605378 396 ntBASIC1.36□□□□□ -2.19
CXCL3P19876 AC107952.2-201ENST00000606048 486 ntBASIC1.36□□□□□ -2.19
CXCL3P19876 AC103810.8-201ENST00000607347 118 ntBASIC1.36□□□□□ -2.19
CXCL3P19876 AL133445.2-201ENST00000611191 527 ntBASIC1.36□□□□□ -2.19
CXCL3P19876 uc_338.5-201ENST00000611839 155 ntBASIC1.36□□□□□ -2.19
CXCL3P19876 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.36□□□□□ -2.19
CXCL3P19876 AC110994.2-201ENST00000635481 492 ntBASIC1.36□□□□□ -2.19
CXCL3P19876 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
CXCL3P19876 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.35□□□□□ -2.19
CXCL3P19876 RNU6-560P-201ENST00000364007 108 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 MIR518D-201ENST00000385014 87 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 RNU6-817P-201ENST00000391083 104 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 RSL24D1P4-201ENST00000400938 484 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 MIR1283-2-201ENST00000408621 87 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 MTCO1P17-201ENST00000411522 491 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 VN1R36P-201ENST00000414936 291 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CXCL3P19876 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.35□□□□□ -2.19
CXCL3P19876 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.35□□□□□ -2.19
CXCL3P19876 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.35□□□□□ -2.19
CXCL3P19876 AL035407.1-201ENST00000429211 571 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.35□□□□□ -2.19
CXCL3P19876 AP000542.1-201ENST00000448473 371 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 FCF1P6-201ENST00000456841 595 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 AC006512.1-201ENST00000468816 291 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
CXCL3P19876 RNU6-143P-201ENST00000516942 93 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.35□□□□□ -2.19
CXCL3P19876 MIR4648-201ENST00000580107 72 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 MIR4285-201ENST00000581001 85 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 MIR4293-201ENST00000584305 78 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.35□□□□□ -2.19
CXCL3P19876 VN1R83P-201ENST00000595685 445 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.35□□□□□ -2.19
CXCL3P19876 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.35□□□□□ -2.19
CXCL3P19876 AC090970.3-201ENST00000612566 866 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
CXCL3P19876 U1.36-201ENST00000620684 176 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 AC099654.9-201ENST00000637055 678 ntBASIC1.35□□□□□ -2.19
CXCL3P19876 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CXCL3P19876 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.35□□□□□ -2.19
CXCL3P19876 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CXCL3P19876 RNU1-57P-201ENST00000384491 166 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 RN7SKP266-201ENST00000410232 287 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 RN7SKP51-201ENST00000410781 304 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CXCL3P19876 AC009310.1-201ENST00000414414 451 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 UBE2V1P4-201ENST00000425374 344 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.34□□□□□ -2.19
CXCL3P19876 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.34□□□□□ -2.19
CXCL3P19876 AC245102.2-201ENST00000448956 180 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
CXCL3P19876 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.34□□□□□ -2.19
CXCL3P19876 UBE2DNL-203ENST00000474922 222 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.34□□□□□ -2.19
CXCL3P19876 AC008837.2-201ENST00000513076 418 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 RNU6-64P-201ENST00000517119 105 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 RNU6-586P-201ENST00000517265 104 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 AC109329.1-201ENST00000518744 317 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 AC009902.1-201ENST00000519351 183 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 LRRC6P1-201ENST00000532188 885 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
CXCL3P19876 IMMP1LP2-201ENST00000552954 492 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.34□□□□□ -2.19
CXCL3P19876 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.34□□□□□ -2.19
CXCL3P19876 AL021368.1-201ENST00000607490 540 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 AC087241.4-201ENST00000612441 480 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.34□□□□□ -2.19
CXCL3P19876 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 AL512427.1-201ENST00000618593 349 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 AC099842.1-201ENST00000619919 596 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.34□□□□□ -2.19
CXCL3P19876 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.34□□□□□ -2.2
CXCL3P19876 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
CXCL3P19876 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.33□□□□□ -2.2
CXCL3P19876 SNORA63.3-201ENST00000362682 132 ntBASIC1.33□□□□□ -2.2
CXCL3P19876 SNORD114-19-201ENST00000363072 75 ntBASIC1.33□□□□□ -2.2
CXCL3P19876 Y_RNA.311-201ENST00000365068 96 ntBASIC1.33□□□□□ -2.2
CXCL3P19876 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CXCL3P19876 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CXCL3P19876 AC068050.1-201ENST00000394891 380 ntBASIC1.33□□□□□ -2.2
CXCL3P19876 RN7SKP101-201ENST00000411376 320 ntBASIC1.33□□□□□ -2.2
CXCL3P19876 AL359704.1-201ENST00000411586 781 ntBASIC1.33□□□□□ -2.2
CXCL3P19876 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.33□□□□□ -2.2
CXCL3P19876 RPL23AP76-201ENST00000441860 458 ntBASIC1.33□□□□□ -2.2
CXCL3P19876 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms