Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.47□□□□□ -1.69
NID1P14543 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.47□□□□□ -1.69
NID1P14543 AC008745.1-201ENST00000604064 271 ntBASIC4.47□□□□□ -1.69
NID1P14543 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.47□□□□□ -1.69
NID1P14543 AC091905.4-201ENST00000623432 202 ntBASIC4.47□□□□□ -1.69
NID1P14543 CR381572.2-201ENST00000624852 397 ntBASIC4.47□□□□□ -1.69
NID1P14543 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NID1P14543 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NID1P14543 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NID1P14543 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NID1P14543 AC099654.2-201ENST00000433031 1980 ntBASIC4.47□□□□□ -1.69
NID1P14543 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NID1P14543 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.47□□□□□ -1.69
NID1P14543 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
NID1P14543 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.46□□□□□ -1.7
NID1P14543 RNU6-834P-201ENST00000362367 110 ntBASIC4.46□□□□□ -1.7
NID1P14543 RN7SKP224-201ENST00000364140 325 ntBASIC4.46□□□□□ -1.7
NID1P14543 Y_RNA.245-201ENST00000364493 95 ntBASIC4.46□□□□□ -1.7
NID1P14543 RNU4-17P-201ENST00000365598 141 ntBASIC4.46□□□□□ -1.7
NID1P14543 RNU6-741P-201ENST00000383889 107 ntBASIC4.46□□□□□ -1.7
NID1P14543 RNU6-80P-201ENST00000384195 107 ntBASIC4.46□□□□□ -1.7
NID1P14543 MIR10B-201ENST00000385011 110 ntBASIC4.46□□□□□ -1.7
NID1P14543 MIR514A1-201ENST00000385133 98 ntBASIC4.46□□□□□ -1.7
NID1P14543 RPL30P13-201ENST00000418873 348 ntBASIC4.46□□□□□ -1.7
NID1P14543 AC091390.3-201ENST00000426478 338 ntBASIC4.46□□□□□ -1.7
NID1P14543 RAB28P5-201ENST00000427490 651 ntBASIC4.46□□□□□ -1.7
NID1P14543 AL512844.2-201ENST00000433990 593 ntBASIC4.46□□□□□ -1.7
NID1P14543 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.46□□□□□ -1.7
NID1P14543 AF186996.7-201ENST00000492781 209 ntBASIC4.46□□□□□ -1.7
NID1P14543 RNU6-513P-201ENST00000516104 104 ntBASIC4.46□□□□□ -1.7
NID1P14543 SNORA72.7-201ENST00000516349 94 ntBASIC4.46□□□□□ -1.7
NID1P14543 AC107918.3-201ENST00000533272 382 ntBASIC4.46□□□□□ -1.7
NID1P14543 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.46□□□□□ -1.7
NID1P14543 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.46□□□□□ -1.7
NID1P14543 SNORD84-203ENST00000584275 78 ntBASIC4.46□□□□□ -1.7
NID1P14543 AL121932.1-201ENST00000605542 214 ntBASIC4.46□□□□□ -1.7
NID1P14543 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.46□□□□□ -1.7
NID1P14543 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.46□□□□□ -1.7
NID1P14543 AL022401.1-201ENST00000619498 108 ntBASIC4.46□□□□□ -1.7
NID1P14543 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NID1P14543 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
NID1P14543 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
NID1P14543 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.46□□□□□ -1.7
NID1P14543 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NID1P14543 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.46□□□□□ -1.7
NID1P14543 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.46□□□□□ -1.7
NID1P14543 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NID1P14543 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
NID1P14543 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NID1P14543 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NID1P14543 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.45□□□□□ -1.7
NID1P14543 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
NID1P14543 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NID1P14543 RNU6-1298P-201ENST00000362456 101 ntBASIC4.45□□□□□ -1.7
NID1P14543 RNU6-105P-201ENST00000363909 104 ntBASIC4.45□□□□□ -1.7
NID1P14543 Y_RNA.319-201ENST00000365138 92 ntBASIC4.45□□□□□ -1.7
NID1P14543 MIR539-201ENST00000365690 78 ntBASIC4.45□□□□□ -1.7
NID1P14543 RNU6-213P-201ENST00000384051 104 ntBASIC4.45□□□□□ -1.7
NID1P14543 RNU6-281P-201ENST00000384212 103 ntBASIC4.45□□□□□ -1.7
NID1P14543 SNORA70E-201ENST00000384492 135 ntBASIC4.45□□□□□ -1.7
NID1P14543 MIR1271-201ENST00000408537 86 ntBASIC4.45□□□□□ -1.7
NID1P14543 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.45□□□□□ -1.7
NID1P14543 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.45□□□□□ -1.7
NID1P14543 AL078601.1-201ENST00000444542 271 ntBASIC4.45□□□□□ -1.7
NID1P14543 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.45□□□□□ -1.7
NID1P14543 AC092798.1-201ENST00000458542 409 ntBASIC4.45□□□□□ -1.7
NID1P14543 snoU109.2-201ENST00000459316 135 ntBASIC4.45□□□□□ -1.7
NID1P14543 RPL23AP56-201ENST00000460778 453 ntBASIC4.45□□□□□ -1.7
NID1P14543 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
NID1P14543 RN7SL346P-201ENST00000491561 294 ntBASIC4.45□□□□□ -1.7
NID1P14543 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
NID1P14543 RN7SKP46-201ENST00000515942 234 ntBASIC4.45□□□□□ -1.7
NID1P14543 Y_RNA.686-201ENST00000516548 134 ntBASIC4.45□□□□□ -1.7
NID1P14543 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.45□□□□□ -1.7
NID1P14543 AP002001.1-203ENST00000534002 267 ntBASIC4.45□□□□□ -1.7
NID1P14543 AC007390.2-201ENST00000606229 3803 ntBASIC4.45□□□□□ -1.7
NID1P14543 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.45□□□□□ -1.7
NID1P14543 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NID1P14543 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NID1P14543 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NID1P14543 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NID1P14543 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NID1P14543 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
NID1P14543 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NID1P14543 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NID1P14543 AC092593.1-201ENST00000515413 1815 ntBASIC4.44□□□□□ -1.7
NID1P14543 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NID1P14543 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.44□□□□□ -1.7
NID1P14543 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NID1P14543 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
NID1P14543 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NID1P14543 FTLP6-201ENST00000355274 422 ntBASIC4.44□□□□□ -1.7
NID1P14543 RNU6-1074P-201ENST00000383995 104 ntBASIC4.44□□□□□ -1.7
NID1P14543 RNA5SP87-201ENST00000384155 118 ntBASIC4.44□□□□□ -1.7
NID1P14543 RNU6-1145P-201ENST00000384246 107 ntBASIC4.44□□□□□ -1.7
NID1P14543 MIR329-1-201ENST00000385028 80 ntBASIC4.44□□□□□ -1.7
NID1P14543 MIR513C-201ENST00000401352 84 ntBASIC4.44□□□□□ -1.7
NID1P14543 AL592291.1-201ENST00000403830 352 ntBASIC4.44□□□□□ -1.7
NID1P14543 ELOCP19-201ENST00000411919 318 ntBASIC4.44□□□□□ -1.7
NID1P14543 COX6B1P1-201ENST00000415962 213 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms