Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC6P09630 AL590639.1-201ENST00000456484 337 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 SNORD109B-201ENST00000458961 67 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 SNORD109A-201ENST00000459128 67 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC6P09630 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.29□□□□□ -1.88
HOXC6P09630 RBBP4P6-201ENST00000508098 202 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC6P09630 Y_RNA.701-201ENST00000516812 110 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 RNU6-1092P-201ENST00000516955 87 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC6P09630 PSMA3P-201ENST00000555485 635 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXC6P09630 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC6P09630 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC6P09630 MIR4435-1-201ENST00000582552 80 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.29□□□□□ -1.88
HOXC6P09630 SNRPGP15-201ENST00000600149 222 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 AC021646.1-201ENST00000605469 484 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 AC007619.2-201ENST00000605743 379 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 AL603758.1-201ENST00000618654 241 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXC6P09630 AC025034.2-201ENST00000623264 286 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC6P09630 U6.114-201ENST00000636407 96 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 TPTEP1-208ENST00000636884 213 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HOXC6P09630 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC6P09630 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXC6P09630 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC6P09630 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HOXC6P09630 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
HOXC6P09630 Y_RNA.67-201ENST00000362870 100 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 Y_RNA.166-201ENST00000363730 102 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 SMIM11P1-201ENST00000369586 178 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 Y_RNA.394-201ENST00000383942 103 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 RNU6-701P-201ENST00000384059 107 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 RNU6-831P-201ENST00000384548 107 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 RN7SKP32-201ENST00000410167 303 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 RNU4-65P-201ENST00000410473 140 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 RNU6-193P-201ENST00000410977 107 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 MTND3P8-201ENST00000412909 339 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC6P09630 AL365400.1-201ENST00000431854 640 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 AC004866.2-201ENST00000438285 481 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 TXNP1-201ENST00000441872 371 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 AL162389.1-201ENST00000449233 177 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXC6P09630 RNU7-180P-201ENST00000459240 63 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 RNU6-329P-201ENST00000459618 107 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXC6P09630 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC6P09630 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC6P09630 Y_RNA.665-201ENST00000516177 98 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 RNU6-390P-201ENST00000516259 103 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 HMGN1P28-201ENST00000521340 364 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 OR5D17P-201ENST00000531492 978 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 AC109635.4-202ENST00000531666 412 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC6P09630 BNIP3P6-201ENST00000549284 499 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC6P09630 AL355375.2-201ENST00000574825 175 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 MIR4742-201ENST00000581069 85 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC6P09630 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
HOXC6P09630 AC104984.5-201ENST00000586878 94 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 AF038458.1-201ENST00000588406 262 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXC6P09630 DUSP12P1-201ENST00000612874 516 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 AL589994.2-201ENST00000621124 579 ntBASIC3.28□□□□□ -1.88
HOXC6P09630 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXC6P09630 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC6P09630 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC6P09630 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXC6P09630 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXC6P09630 AL139276.1-201ENST00000311910 1001 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 RNU6-1155P-201ENST00000363554 107 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 U3.6-201ENST00000363622 211 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 RNU6-960P-201ENST00000364056 120 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 FAT1P1-201ENST00000406588 507 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXC6P09630 AC007677.1-201ENST00000445757 515 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 HMGB3P8-201ENST00000449709 577 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 NIPA2P5-201ENST00000452282 464 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 SNORD97-201ENST00000459187 142 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 AC007547.1-201ENST00000462177 490 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 RPL31P13-201ENST00000484151 370 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 AC083904.1-201ENST00000487828 231 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXC6P09630 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXC6P09630 CCDC34P1-201ENST00000507441 517 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 AC104806.1-201ENST00000508720 308 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXC6P09630 RNU6-277P-201ENST00000516272 106 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXC6P09630 RPL7P20-201ENST00000520308 745 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 AC087241.2-201ENST00000535801 324 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXC6P09630 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms