Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AC078974.1-201ENST00000411597 223 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 ELOCP17-201ENST00000414751 326 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 ELOCP9-201ENST00000418624 239 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AC018634.1-201ENST00000437554 401 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 SDR42E1P3-201ENST00000438345 502 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AL078601.1-201ENST00000444542 271 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.89□□□□□ -2.11
ERCC1P07992 MTATP6P14-201ENST00000455189 673 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.89□□□□□ -2.11
ERCC1P07992 SNORD97-201ENST00000459187 142 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 MTND1P3-201ENST00000484956 952 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.89□□□□□ -2.11
ERCC1P07992 RNU6-678P-201ENST00000516832 109 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 SNORA48.11-201ENST00000517015 89 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AP000873.5-201ENST00000533906 236 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ERCC1P07992 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.89□□□□□ -2.11
ERCC1P07992 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.89□□□□□ -2.11
ERCC1P07992 AC008749.1-201ENST00000597650 306 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AL713866.2-201ENST00000603579 219 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AC087045.1-201ENST00000605856 382 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AC092953.2-201ENST00000608000 699 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AC009974.1-201ENST00000608881 455 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AP000484.1-201ENST00000620067 1252 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 FRG1KP-201ENST00000623592 341 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AC017037.3-201ENST00000625016 472 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AP000720.1-201ENST00000625091 483 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.89□□□□□ -2.11
ERCC1P07992 MIR219B-201ENST00000637023 88 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 MTND5P42-201ENST00000637720 498 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ERCC1P07992 AC002543.1-201ENST00000299783 1954 ntBASIC1.89□□□□□ -2.11
ERCC1P07992 AC092881.1-201ENST00000638218 2733 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 RNA5SP88-201ENST00000365560 109 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 AL133475.1-201ENST00000404414 305 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 HMGB3P2-201ENST00000411913 584 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.88□□□□□ -2.11
ERCC1P07992 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.88□□□□□ -2.11
ERCC1P07992 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.88□□□□□ -2.11
ERCC1P07992 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.88□□□□□ -2.11
ERCC1P07992 AL591704.1-201ENST00000432574 275 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.88□□□□□ -2.11
ERCC1P07992 MTCO1P42-201ENST00000457379 726 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 AC117522.2-201ENST00000510049 657 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 SNORA4.4-201ENST00000515921 135 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 AC107953.1-201ENST00000522216 297 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.88□□□□□ -2.11
ERCC1P07992 AC233702.2-202ENST00000562547 291 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 AL356432.3-201ENST00000568952 465 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 AC002984.1-201ENST00000591692 448 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 AL031274.2-201ENST00000599419 203 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.88□□□□□ -2.11
ERCC1P07992 AL365204.3-201ENST00000612448 685 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 AC008121.3-201ENST00000618726 433 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 AL589994.2-201ENST00000621124 579 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 AC091953.2-201ENST00000623979 160 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.88□□□□□ -2.11
ERCC1P07992 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.88□□□□□ -2.11
ERCC1P07992 AC008555.8-201ENST00000623602 2168 ntBASIC1.88□□□□□ -2.11
ERCC1P07992 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.87□□□□□ -2.11
ERCC1P07992 SNORA25B-201ENST00000365507 128 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ERCC1P07992 Y_RNA.534-201ENST00000384599 112 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 MIR504-201ENST00000385065 83 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
ERCC1P07992 SNORA40C-201ENST00000391285 128 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 RNU6-757P-201ENST00000410334 100 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 RNU2-62P-201ENST00000410868 191 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.87□□□□□ -2.11
ERCC1P07992 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.87□□□□□ -2.11
ERCC1P07992 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.87□□□□□ -2.11
ERCC1P07992 AC092648.1-201ENST00000425870 423 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.87□□□□□ -2.11
ERCC1P07992 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.87□□□□□ -2.11
ERCC1P07992 PMCHL2-203ENST00000457791 237 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 RNU6-717P-201ENST00000459076 104 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 RPL7P43-201ENST00000478876 753 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 RPL9P6-201ENST00000492764 598 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.87□□□□□ -2.11
ERCC1P07992 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.87□□□□□ -2.11
ERCC1P07992 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.87□□□□□ -2.11
ERCC1P07992 AL109918.3-201ENST00000603072 338 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 AC107952.2-201ENST00000606048 486 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 AL157392.4-201ENST00000609756 345 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 AL627230.6-201ENST00000611129 280 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 AC022202.1-201ENST00000613515 211 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.87□□□□□ -2.11
ERCC1P07992 AC091932.3-201ENST00000624223 323 ntBASIC1.87□□□□□ -2.11
ERCC1P07992 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
ERCC1P07992 MIR122-201ENST00000385044 85 ntBASIC1.86□□□□□ -2.11
ERCC1P07992 FCF1P10-201ENST00000407590 479 ntBASIC1.86□□□□□ -2.11
ERCC1P07992 HMGB1P11-201ENST00000413899 637 ntBASIC1.86□□□□□ -2.11
ERCC1P07992 AL591212.2-201ENST00000433923 257 ntBASIC1.86□□□□□ -2.11
ERCC1P07992 USP9YP24-201ENST00000434374 697 ntBASIC1.86□□□□□ -2.11
ERCC1P07992 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.86□□□□□ -2.11
ERCC1P07992 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.86□□□□□ -2.11
ERCC1P07992 USP9YP17-201ENST00000444617 696 ntBASIC1.86□□□□□ -2.11
ERCC1P07992 AC003071.1-201ENST00000451219 789 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms