Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RN7SKP258-201ENST00000517151 304 ntBASIC1.55□□□□□ -2.16
TPM3P06753 AC023538.1-201ENST00000534576 736 ntBASIC1.55□□□□□ -2.16
TPM3P06753 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.55□□□□□ -2.16
TPM3P06753 MIR5708-201ENST00000579723 85 ntBASIC1.55□□□□□ -2.16
TPM3P06753 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.55□□□□□ -2.16
TPM3P06753 AC006338.1-201ENST00000618453 749 ntBASIC1.55□□□□□ -2.16
TPM3P06753 AC013470.4-201ENST00000619978 986 ntBASIC1.55□□□□□ -2.16
TPM3P06753 MIR6852-201ENST00000621699 66 ntBASIC1.55□□□□□ -2.16
TPM3P06753 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.55□□□□□ -2.16
TPM3P06753 AL079343.1-201ENST00000572358 1771 ntBASIC1.54□□□□□ -2.16
TPM3P06753 MIR424-201ENST00000362227 98 ntBASIC1.54□□□□□ -2.16
TPM3P06753 RNU6-512P-201ENST00000364438 103 ntBASIC1.54□□□□□ -2.16
TPM3P06753 RNU6-1280P-201ENST00000365211 107 ntBASIC1.54□□□□□ -2.16
TPM3P06753 RNU6-1032P-201ENST00000384100 107 ntBASIC1.54□□□□□ -2.16
TPM3P06753 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.54□□□□□ -2.16
TPM3P06753 MTND5P14-201ENST00000441481 1267 ntBASIC1.54□□□□□ -2.16
TPM3P06753 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.54□□□□□ -2.16
TPM3P06753 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.54□□□□□ -2.16
TPM3P06753 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.54□□□□□ -2.16
TPM3P06753 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.54□□□□□ -2.16
TPM3P06753 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.54□□□□□ -2.16
TPM3P06753 RNU6-295P-201ENST00000516901 104 ntBASIC1.54□□□□□ -2.16
TPM3P06753 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.54□□□□□ -2.16
TPM3P06753 AC011494.1-201ENST00000596454 237 ntBASIC1.54□□□□□ -2.16
TPM3P06753 AC098483.2-201ENST00000603158 454 ntBASIC1.54□□□□□ -2.16
TPM3P06753 AC099842.1-201ENST00000619919 596 ntBASIC1.54□□□□□ -2.16
TPM3P06753 U1.36-201ENST00000620684 176 ntBASIC1.54□□□□□ -2.16
TPM3P06753 AC093875.1-201ENST00000623688 504 ntBASIC1.54□□□□□ -2.16
TPM3P06753 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.54□□□□□ -2.16
TPM3P06753 RNU6-188P-201ENST00000364207 107 ntBASIC1.53□□□□□ -2.16
TPM3P06753 RNU6-609P-201ENST00000365459 107 ntBASIC1.53□□□□□ -2.16
TPM3P06753 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
TPM3P06753 AL133475.1-201ENST00000404414 305 ntBASIC1.53□□□□□ -2.16
TPM3P06753 AC068533.2-201ENST00000411872 306 ntBASIC1.53□□□□□ -2.16
TPM3P06753 MTND1P31-201ENST00000449206 961 ntBASIC1.53□□□□□ -2.16
TPM3P06753 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.53□□□□□ -2.16
TPM3P06753 RPL7P43-201ENST00000478876 753 ntBASIC1.53□□□□□ -2.16
TPM3P06753 TRBV12-1-201ENST00000479785 344 ntBASIC1.53□□□□□ -2.16
TPM3P06753 RNU6-1225P-201ENST00000516336 65 ntBASIC1.53□□□□□ -2.16
TPM3P06753 RNU5B-3P-201ENST00000516601 115 ntBASIC1.53□□□□□ -2.16
TPM3P06753 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.53□□□□□ -2.16
TPM3P06753 SUB1P3-201ENST00000564581 315 ntBASIC1.53□□□□□ -2.16
TPM3P06753 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.53□□□□□ -2.16
TPM3P06753 AC092447.10-201ENST00000620607 1652 ntBASIC1.53□□□□□ -2.16
TPM3P06753 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.53□□□□□ -2.17
TPM3P06753 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.52□□□□□ -2.17
TPM3P06753 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
TPM3P06753 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TPM3P06753 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.52□□□□□ -2.17
TPM3P06753 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.52□□□□□ -2.17
TPM3P06753 AC104563.1-201ENST00000476147 376 ntBASIC1.52□□□□□ -2.17
TPM3P06753 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.52□□□□□ -2.17
TPM3P06753 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.52□□□□□ -2.17
TPM3P06753 RN7SKP179-201ENST00000516126 217 ntBASIC1.52□□□□□ -2.17
TPM3P06753 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.52□□□□□ -2.17
TPM3P06753 AC093012.1-202ENST00000549403 582 ntBASIC1.52□□□□□ -2.17
TPM3P06753 AC023825.1-201ENST00000566704 1030 ntBASIC1.52□□□□□ -2.17
TPM3P06753 AC069545.1-201ENST00000605671 358 ntBASIC1.52□□□□□ -2.17
TPM3P06753 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.52□□□□□ -2.17
TPM3P06753 U6.99-201ENST00000637524 83 ntBASIC1.52□□□□□ -2.17
TPM3P06753 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TPM3P06753 AC138393.1-203ENST00000327086 343 ntBASIC1.51□□□□□ -2.17
TPM3P06753 RNU6-203P-201ENST00000384038 104 ntBASIC1.51□□□□□ -2.17
TPM3P06753 SNORD26-201ENST00000384147 75 ntBASIC1.51□□□□□ -2.17
TPM3P06753 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TPM3P06753 RNU11-3P-201ENST00000391111 133 ntBASIC1.51□□□□□ -2.17
TPM3P06753 RNU2-48P-201ENST00000410694 191 ntBASIC1.51□□□□□ -2.17
TPM3P06753 RNA5SP501-201ENST00000410990 112 ntBASIC1.51□□□□□ -2.17
TPM3P06753 RPL21P24-201ENST00000413752 448 ntBASIC1.51□□□□□ -2.17
TPM3P06753 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.51□□□□□ -2.17
TPM3P06753 BRK1P2-201ENST00000442875 223 ntBASIC1.51□□□□□ -2.17
TPM3P06753 AL096829.2-201ENST00000446582 742 ntBASIC1.51□□□□□ -2.17
TPM3P06753 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.51□□□□□ -2.17
TPM3P06753 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.51□□□□□ -2.17
TPM3P06753 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.51□□□□□ -2.17
TPM3P06753 AC078880.5-201ENST00000617845 421 ntBASIC1.51□□□□□ -2.17
TPM3P06753 AP003476.1-201ENST00000623984 516 ntBASIC1.51□□□□□ -2.17
TPM3P06753 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TPM3P06753 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.5□□□□□ -2.17
TPM3P06753 AP005901.5-201ENST00000545779 1796 ntBASIC1.5□□□□□ -2.17
TPM3P06753 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.5□□□□□ -2.17
TPM3P06753 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TPM3P06753 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.5□□□□□ -2.17
TPM3P06753 MIR1262-201ENST00000408276 93 ntBASIC1.5□□□□□ -2.17
TPM3P06753 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.5□□□□□ -2.17
TPM3P06753 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.5□□□□□ -2.17
TPM3P06753 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.5□□□□□ -2.17
TPM3P06753 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.5□□□□□ -2.17
TPM3P06753 RPL31P58-201ENST00000469001 379 ntBASIC1.5□□□□□ -2.17
TPM3P06753 AC023194.1-201ENST00000493084 308 ntBASIC1.5□□□□□ -2.17
TPM3P06753 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.5□□□□□ -2.17
TPM3P06753 MTND4P2-201ENST00000507767 1203 ntBASIC1.5□□□□□ -2.17
TPM3P06753 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.5□□□□□ -2.17
TPM3P06753 RNU6-586P-201ENST00000517265 104 ntBASIC1.5□□□□□ -2.17
TPM3P06753 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.5□□□□□ -2.17
TPM3P06753 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.5□□□□□ -2.17
TPM3P06753 AC068338.1-201ENST00000565567 176 ntBASIC1.5□□□□□ -2.17
TPM3P06753 VN1R87P-201ENST00000596706 487 ntBASIC1.5□□□□□ -2.17
TPM3P06753 RPL30P11-203ENST00000598995 310 ntBASIC1.5□□□□□ -2.17
TPM3P06753 AL670379.10-201ENST00000604330 253 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms