Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 VDAC1P3-201ENST00000434069 851 ntBASIC4.48□□□□□ -1.69
RAPGEF3O95398 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.48□□□□□ -1.69
RAPGEF3O95398 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.48□□□□□ -1.69
RAPGEF3O95398 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.48□□□□□ -1.69
RAPGEF3O95398 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.48□□□□□ -1.69
RAPGEF3O95398 RPS3P1-201ENST00000456781 192 ntBASIC4.48□□□□□ -1.69
RAPGEF3O95398 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.48□□□□□ -1.69
RAPGEF3O95398 FAM206BP-201ENST00000510179 541 ntBASIC4.48□□□□□ -1.69
RAPGEF3O95398 SCARNA15.2-201ENST00000516409 127 ntBASIC4.48□□□□□ -1.69
RAPGEF3O95398 NARSP2-201ENST00000518524 679 ntBASIC4.48□□□□□ -1.69
RAPGEF3O95398 BTF3P12-201ENST00000519620 469 ntBASIC4.48□□□□□ -1.69
RAPGEF3O95398 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.48□□□□□ -1.69
RAPGEF3O95398 AC107953.1-201ENST00000522216 297 ntBASIC4.48□□□□□ -1.69
RAPGEF3O95398 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.48□□□□□ -1.69
RAPGEF3O95398 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.48□□□□□ -1.69
RAPGEF3O95398 MIR4738-201ENST00000579134 87 ntBASIC4.48□□□□□ -1.69
RAPGEF3O95398 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.48□□□□□ -1.69
RAPGEF3O95398 AL158032.1-201ENST00000605401 106 ntBASIC4.48□□□□□ -1.69
RAPGEF3O95398 AC009570.1-201ENST00000609599 745 ntBASIC4.48□□□□□ -1.69
RAPGEF3O95398 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.48□□□□□ -1.69
RAPGEF3O95398 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RAPGEF3O95398 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RAPGEF3O95398 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RAPGEF3O95398 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RAPGEF3O95398 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.47□□□□□ -1.69
RAPGEF3O95398 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.47□□□□□ -1.69
RAPGEF3O95398 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RAPGEF3O95398 RNU6-50P-201ENST00000362356 103 ntBASIC4.47□□□□□ -1.69
RAPGEF3O95398 SNORA32.2-201ENST00000384049 122 ntBASIC4.47□□□□□ -1.69
RAPGEF3O95398 RNU6-851P-201ENST00000384565 107 ntBASIC4.47□□□□□ -1.69
RAPGEF3O95398 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RAPGEF3O95398 RNA5SP111-201ENST00000411386 101 ntBASIC4.47□□□□□ -1.69
RAPGEF3O95398 RPS12P24-201ENST00000412619 387 ntBASIC4.47□□□□□ -1.69
RAPGEF3O95398 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.47□□□□□ -1.69
RAPGEF3O95398 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.47□□□□□ -1.69
RAPGEF3O95398 NDUFB4P7-201ENST00000423198 363 ntBASIC4.47□□□□□ -1.69
RAPGEF3O95398 AL591212.2-201ENST00000433923 257 ntBASIC4.47□□□□□ -1.69
RAPGEF3O95398 snoU13.15-201ENST00000459407 104 ntBASIC4.47□□□□□ -1.69
RAPGEF3O95398 AL049874.1-201ENST00000489560 388 ntBASIC4.47□□□□□ -1.69
RAPGEF3O95398 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.47□□□□□ -1.69
RAPGEF3O95398 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.47□□□□□ -1.69
RAPGEF3O95398 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.47□□□□□ -1.69
RAPGEF3O95398 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.47□□□□□ -1.69
RAPGEF3O95398 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.47□□□□□ -1.69
RAPGEF3O95398 RPL7P20-201ENST00000520308 745 ntBASIC4.47□□□□□ -1.69
RAPGEF3O95398 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.47□□□□□ -1.69
RAPGEF3O95398 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.47□□□□□ -1.69
RAPGEF3O95398 AC098826.3-201ENST00000603823 466 ntBASIC4.47□□□□□ -1.69
RAPGEF3O95398 AL022345.1-201ENST00000607292 135 ntBASIC4.47□□□□□ -1.69
RAPGEF3O95398 AC092807.2-201ENST00000609367 243 ntBASIC4.47□□□□□ -1.69
RAPGEF3O95398 AC064859.1-201ENST00000624741 174 ntBASIC4.47□□□□□ -1.69
RAPGEF3O95398 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RAPGEF3O95398 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RAPGEF3O95398 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RAPGEF3O95398 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RAPGEF3O95398 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RAPGEF3O95398 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.46□□□□□ -1.7
RAPGEF3O95398 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RAPGEF3O95398 Y_RNA.356-201ENST00000365475 113 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RAPGEF3O95398 RNU6-1127P-201ENST00000384580 107 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 AL356432.1-201ENST00000405809 419 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 RNU6-1148P-201ENST00000410992 104 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.46□□□□□ -1.7
RAPGEF3O95398 USP9YP20-201ENST00000419224 558 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 ARL5AP4-201ENST00000430731 512 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.46□□□□□ -1.7
RAPGEF3O95398 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.46□□□□□ -1.7
RAPGEF3O95398 SCARNA18-201ENST00000459004 134 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 AC004801.2-202ENST00000463559 283 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 RPL9P32-201ENST00000464118 620 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 VN1R17P-201ENST00000472048 1090 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.46□□□□□ -1.7
RAPGEF3O95398 ANXA2P1-201ENST00000505539 926 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 CCDC34P1-201ENST00000507441 517 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 NDUFB4P9-201ENST00000511646 388 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 RNA5SP24-201ENST00000516478 95 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 RNU7-30P-201ENST00000516835 62 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.46□□□□□ -1.7
RAPGEF3O95398 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.46□□□□□ -1.7
RAPGEF3O95398 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.46□□□□□ -1.7
RAPGEF3O95398 AC022893.3-201ENST00000607665 437 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 MIR4727-201ENST00000622232 55 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 AC091903.1-201ENST00000624322 454 ntBASIC4.46□□□□□ -1.7
RAPGEF3O95398 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RAPGEF3O95398 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RAPGEF3O95398 OR4G2P-202ENST00000641004 1759 ntBASIC4.45□□□□□ -1.7
RAPGEF3O95398 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.45□□□□□ -1.7
RAPGEF3O95398 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RAPGEF3O95398 AC066616.2-201ENST00000559334 1481 ntBASIC4.45□□□□□ -1.7
RAPGEF3O95398 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.45□□□□□ -1.7
RAPGEF3O95398 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RAPGEF3O95398 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RAPGEF3O95398 RNU6-288P-201ENST00000363690 104 ntBASIC4.45□□□□□ -1.7
RAPGEF3O95398 RNU6-694P-201ENST00000364071 147 ntBASIC4.45□□□□□ -1.7
RAPGEF3O95398 SNORD6-201ENST00000365444 73 ntBASIC4.45□□□□□ -1.7
RAPGEF3O95398 Y_RNA.373-201ENST00000365600 103 ntBASIC4.45□□□□□ -1.7
RAPGEF3O95398 CISD1P1-201ENST00000393907 327 ntBASIC4.45□□□□□ -1.7
RAPGEF3O95398 RPL7P10-201ENST00000417407 739 ntBASIC4.45□□□□□ -1.7
RAPGEF3O95398 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms