Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RPS4XP3-201ENST00000398541 413 ntBASIC0.11□□□□□ -2.39
USH2AO75445 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.11□□□□□ -2.39
USH2AO75445 AC099513.1-201ENST00000490423 301 ntBASIC0.11□□□□□ -2.39
USH2AO75445 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.11□□□□□ -2.39
USH2AO75445 MIR8065-201ENST00000620577 100 ntBASIC0.11□□□□□ -2.39
USH2AO75445 MTND5P17-201ENST00000418405 1603 ntBASIC0.11□□□□□ -2.39
USH2AO75445 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
USH2AO75445 RNU6-654P-201ENST00000364373 107 ntBASIC0.1□□□□□ -2.39
USH2AO75445 SFR1P1-201ENST00000403720 688 ntBASIC0.1□□□□□ -2.39
USH2AO75445 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.1□□□□□ -2.39
USH2AO75445 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.1□□□□□ -2.39
USH2AO75445 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.1□□□□□ -2.39
USH2AO75445 AC115085.1-201ENST00000588924 229 ntBASIC0.1□□□□□ -2.39
USH2AO75445 LLPHP1-201ENST00000603571 367 ntBASIC0.1□□□□□ -2.39
USH2AO75445 GDI2P1-201ENST00000429312 1336 ntBASIC0.1□□□□□ -2.39
USH2AO75445 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.1□□□□□ -2.39
USH2AO75445 Y_RNA.551-201ENST00000384661 102 ntBASIC0.1□□□□□ -2.39
USH2AO75445 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.1□□□□□ -2.39
USH2AO75445 RPS3AP1-201ENST00000413190 320 ntBASIC0.1□□□□□ -2.39
USH2AO75445 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.1□□□□□ -2.39
USH2AO75445 TPTE2P6-202ENST00000445572 1007 ntBASIC0.1□□□□□ -2.39
USH2AO75445 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.1□□□□□ -2.39
USH2AO75445 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.1□□□□□ -2.39
USH2AO75445 SCARNA8-201ENST00000515924 131 ntBASIC0.1□□□□□ -2.39
USH2AO75445 Y_RNA.711-201ENST00000516993 102 ntBASIC0.1□□□□□ -2.39
USH2AO75445 AC121334.2-201ENST00000605387 271 ntBASIC0.1□□□□□ -2.39
USH2AO75445 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC0.1□□□□□ -2.39
USH2AO75445 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.1□□□□□ -2.39
USH2AO75445 MTATP6P23-201ENST00000440153 476 ntBASIC0.1□□□□□ -2.39
USH2AO75445 AC239798.3-201ENST00000454459 408 ntBASIC0.1□□□□□ -2.39
USH2AO75445 RPS27P22-201ENST00000478056 241 ntBASIC0.1□□□□□ -2.39
USH2AO75445 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.1□□□□□ -2.39
USH2AO75445 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.1□□□□□ -2.39
USH2AO75445 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.1□□□□□ -2.39
USH2AO75445 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.1□□□□□ -2.39
USH2AO75445 AC147055.4-201ENST00000504399 745 ntBASIC0.1□□□□□ -2.39
USH2AO75445 AC008562.1-201ENST00000521763 330 ntBASIC0.1□□□□□ -2.39
USH2AO75445 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.1□□□□□ -2.39
USH2AO75445 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.1□□□□□ -2.39
USH2AO75445 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.1□□□□□ -2.39
USH2AO75445 RNU4-42P-201ENST00000364738 142 ntBASIC0.1□□□□□ -2.39
USH2AO75445 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.1□□□□□ -2.39
USH2AO75445 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.1□□□□□ -2.39
USH2AO75445 RPS26P55-201ENST00000471178 356 ntBASIC0.1□□□□□ -2.39
USH2AO75445 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.1□□□□□ -2.39
USH2AO75445 MIR4658-201ENST00000584344 65 ntBASIC0.1□□□□□ -2.39
USH2AO75445 SNORD14A-201ENST00000606526 91 ntBASIC0.1□□□□□ -2.39
USH2AO75445 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.1□□□□□ -2.39
USH2AO75445 SNORA29-201ENST00000384183 140 ntBASIC0.09□□□□□ -2.39
USH2AO75445 Y_RNA.616-201ENST00000410835 95 ntBASIC0.09□□□□□ -2.39
USH2AO75445 SNORA31.18-201ENST00000517043 134 ntBASIC0.09□□□□□ -2.39
USH2AO75445 AC136628.3-201ENST00000521868 290 ntBASIC0.09□□□□□ -2.39
USH2AO75445 HMGB1P14-201ENST00000557424 591 ntBASIC0.09□□□□□ -2.39
USH2AO75445 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.39
USH2AO75445 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.09□□□□□ -2.39
USH2AO75445 ARL2BPP3-201ENST00000421226 480 ntBASIC0.09□□□□□ -2.39
USH2AO75445 RPL36AP53-201ENST00000432891 316 ntBASIC0.09□□□□□ -2.39
USH2AO75445 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.09□□□□□ -2.39
USH2AO75445 RNU7-193P-201ENST00000516723 65 ntBASIC0.09□□□□□ -2.39
USH2AO75445 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.09□□□□□ -2.4
USH2AO75445 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
USH2AO75445 RNU6-335P-201ENST00000364563 113 ntBASIC0.09□□□□□ -2.4
USH2AO75445 RNU2-64P-201ENST00000411315 191 ntBASIC0.09□□□□□ -2.4
USH2AO75445 AC013410.2-201ENST00000422627 201 ntBASIC0.09□□□□□ -2.4
USH2AO75445 RPL23AP3-201ENST00000453844 468 ntBASIC0.09□□□□□ -2.4
USH2AO75445 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.09□□□□□ -2.4
USH2AO75445 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.09□□□□□ -2.4
USH2AO75445 AC104417.1-201ENST00000523974 751 ntBASIC0.09□□□□□ -2.4
USH2AO75445 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.09□□□□□ -2.4
USH2AO75445 AGGF1P5-201ENST00000567900 919 ntBASIC0.09□□□□□ -2.4
USH2AO75445 VN1R84P-201ENST00000593697 235 ntBASIC0.09□□□□□ -2.4
USH2AO75445 AC123786.2-201ENST00000603459 275 ntBASIC0.09□□□□□ -2.4
USH2AO75445 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.09□□□□□ -2.4
USH2AO75445 MIR548AZ-201ENST00000616567 95 ntBASIC0.09□□□□□ -2.4
USH2AO75445 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.09□□□□□ -2.4
USH2AO75445 MIR92A1-201ENST00000385233 78 ntBASIC0.09□□□□□ -2.4
USH2AO75445 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
USH2AO75445 AC013268.2-201ENST00000420753 337 ntBASIC0.09□□□□□ -2.4
USH2AO75445 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.09□□□□□ -2.4
USH2AO75445 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
USH2AO75445 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.09□□□□□ -2.4
USH2AO75445 MIR4667-201ENST00000578933 66 ntBASIC0.09□□□□□ -2.4
USH2AO75445 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.09□□□□□ -2.4
USH2AO75445 AC012254.4-201ENST00000588843 273 ntBASIC0.09□□□□□ -2.4
USH2AO75445 NIFKP6-201ENST00000598115 845 ntBASIC0.09□□□□□ -2.4
USH2AO75445 VN1R81P-201ENST00000602085 372 ntBASIC0.09□□□□□ -2.4
USH2AO75445 HSPE1P19-201ENST00000603327 295 ntBASIC0.09□□□□□ -2.4
USH2AO75445 RNU6-370P-201ENST00000411008 104 ntBASIC0.08□□□□□ -2.4
USH2AO75445 ELOCP6-201ENST00000429066 328 ntBASIC0.08□□□□□ -2.4
USH2AO75445 AL513343.1-201ENST00000451818 792 ntBASIC0.08□□□□□ -2.4
USH2AO75445 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.08□□□□□ -2.4
USH2AO75445 ELOCP12-201ENST00000458706 328 ntBASIC0.08□□□□□ -2.4
USH2AO75445 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.08□□□□□ -2.4
USH2AO75445 AL158211.1-201ENST00000566763 763 ntBASIC0.08□□□□□ -2.4
USH2AO75445 MIR4764-201ENST00000580680 88 ntBASIC0.08□□□□□ -2.4
USH2AO75445 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.08□□□□□ -2.4
USH2AO75445 AC090953.1-201ENST00000604305 1092 ntBASIC0.08□□□□□ -2.4
USH2AO75445 AC015849.6-201ENST00000605454 474 ntBASIC0.08□□□□□ -2.4
USH2AO75445 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.08□□□□□ -2.4
USH2AO75445 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms