Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF40O75150 U8.7-201ENST00000364940 136 ntBASIC5.47□□□□□ -1.53
RNF40O75150 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.47□□□□□ -1.53
RNF40O75150 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.47□□□□□ -1.53
RNF40O75150 RNU6-625P-201ENST00000459412 107 ntBASIC5.47□□□□□ -1.53
RNF40O75150 AC083982.1-201ENST00000485679 344 ntBASIC5.47□□□□□ -1.53
RNF40O75150 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF40O75150 RNU5E-3P-201ENST00000515913 68 ntBASIC5.47□□□□□ -1.53
RNF40O75150 RNU6-155P-201ENST00000516347 100 ntBASIC5.47□□□□□ -1.53
RNF40O75150 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF40O75150 MIR4480-201ENST00000582492 71 ntBASIC5.47□□□□□ -1.53
RNF40O75150 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF40O75150 MIR4512-201ENST00000583257 77 ntBASIC5.47□□□□□ -1.53
RNF40O75150 AL354798.1-201ENST00000622505 329 ntBASIC5.47□□□□□ -1.53
RNF40O75150 AC091953.3-201ENST00000623220 236 ntBASIC5.47□□□□□ -1.53
RNF40O75150 MIR3914-2-201ENST00000637339 95 ntBASIC5.47□□□□□ -1.53
RNF40O75150 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RNF40O75150 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF40O75150 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF40O75150 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF40O75150 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF40O75150 AL359693.1-201ENST00000614959 2407 ntBASIC5.47□□□□□ -1.53
RNF40O75150 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF40O75150 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF40O75150 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RNF40O75150 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RNF40O75150 AC026951.1-201ENST00000559530 2459 ntBASIC5.46□□□□□ -1.54
RNF40O75150 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RNF40O75150 RNU6-873P-201ENST00000363833 107 ntBASIC5.46□□□□□ -1.54
RNF40O75150 SNORA70E-201ENST00000384492 135 ntBASIC5.46□□□□□ -1.54
RNF40O75150 MIR105-1-201ENST00000385222 81 ntBASIC5.46□□□□□ -1.54
RNF40O75150 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RNF40O75150 RNU2-54P-201ENST00000410299 190 ntBASIC5.46□□□□□ -1.54
RNF40O75150 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.46□□□□□ -1.54
RNF40O75150 AL358075.3-201ENST00000426289 226 ntBASIC5.46□□□□□ -1.54
RNF40O75150 AL135790.2-201ENST00000437701 267 ntBASIC5.46□□□□□ -1.54
RNF40O75150 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.46□□□□□ -1.54
RNF40O75150 AC018448.1-201ENST00000552843 316 ntBASIC5.46□□□□□ -1.54
RNF40O75150 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF40O75150 MIR3934-201ENST00000579806 107 ntBASIC5.46□□□□□ -1.54
RNF40O75150 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF40O75150 AC024153.1-201ENST00000603103 365 ntBASIC5.46□□□□□ -1.54
RNF40O75150 AC010999.1-201ENST00000611856 324 ntBASIC5.46□□□□□ -1.54
RNF40O75150 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF40O75150 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
RNF40O75150 AC004467.1-201ENST00000615678 330 ntBASIC5.46□□□□□ -1.54
RNF40O75150 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF40O75150 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
RNF40O75150 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.46□□□□□ -1.54
RNF40O75150 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF40O75150 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RNF40O75150 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF40O75150 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RNF40O75150 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RNF40O75150 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RNF40O75150 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RNF40O75150 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RNF40O75150 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF40O75150 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF40O75150 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF40O75150 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF40O75150 RNY1P11-201ENST00000363759 113 ntBASIC5.45□□□□□ -1.54
RNF40O75150 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF40O75150 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF40O75150 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF40O75150 AL589765.3-201ENST00000446084 462 ntBASIC5.45□□□□□ -1.54
RNF40O75150 MTATP6P7-201ENST00000453315 681 ntBASIC5.45□□□□□ -1.54
RNF40O75150 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.45□□□□□ -1.54
RNF40O75150 snoU13.20-201ENST00000459180 104 ntBASIC5.45□□□□□ -1.54
RNF40O75150 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.45□□□□□ -1.54
RNF40O75150 RNA5SP290-201ENST00000517133 127 ntBASIC5.45□□□□□ -1.54
RNF40O75150 RNA5SP373-201ENST00000517271 95 ntBASIC5.45□□□□□ -1.54
RNF40O75150 AP001328.1-201ENST00000528550 176 ntBASIC5.45□□□□□ -1.54
RNF40O75150 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF40O75150 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.45□□□□□ -1.54
RNF40O75150 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.45□□□□□ -1.54
RNF40O75150 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF40O75150 AL590392.1-201ENST00000604960 446 ntBASIC5.45□□□□□ -1.54
RNF40O75150 AL138963.2-201ENST00000605137 226 ntBASIC5.45□□□□□ -1.54
RNF40O75150 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.45□□□□□ -1.54
RNF40O75150 AC134026.1-201ENST00000623249 2239 ntBASIC5.45□□□□□ -1.54
RNF40O75150 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF40O75150 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF40O75150 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF40O75150 AF127577.6-201ENST00000623352 2191 ntBASIC5.45□□□□□ -1.54
RNF40O75150 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RNF40O75150 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.44□□□□□ -1.54
RNF40O75150 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF40O75150 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF40O75150 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF40O75150 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF40O75150 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF40O75150 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.44□□□□□ -1.54
RNF40O75150 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF40O75150 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF40O75150 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF40O75150 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF40O75150 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RNF40O75150 Y_RNA.251-201ENST00000364551 99 ntBASIC5.44□□□□□ -1.54
RNF40O75150 RN7SKP153-201ENST00000365026 316 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms